RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
TRIO-220ENST00000512979 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
TRIO-220ENST00000512979 TMCO4Q5TGY1 634 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
TRIO-220ENST00000512979 UCN2Q96RP3 112 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 UTP14AQ9BVJ6 771 aaKnown RBP12.27□□□□□ -0.45
TRIO-220ENST00000512979 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
TRIO-220ENST00000512979 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 SOX11P35716 441 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 HSP90AB3PQ58FF7 597 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 PSMD1Q99460 953 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
TRIO-220ENST00000512979 USTQ9Y2C2 406 aa12.26□□□□□ -0.45
TRIO-220ENST00000512979 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
TRIO-220ENST00000512979 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
TRIO-220ENST00000512979 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
TRIO-220ENST00000512979 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
TRIO-220ENST00000512979 CRAMP1Q96RY5 1269 aa12.25□□□□□ -0.45
TRIO-220ENST00000512979 DDX21Q9NR30 783 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIO-220ENST00000512979 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
TRIO-220ENST00000512979 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
TRIO-220ENST00000512979 FZD9O00144 591 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 SLC10A5Q5PT55 438 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 RETREG3Q86VR2 466 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 JDP2Q8WYK2 163 aa12.24□□□□□ -0.45
TRIO-220ENST00000512979 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
TRIO-220ENST00000512979 RNF123Q5XPI4 1314 aa12.23□□□□□ -0.45
TRIO-220ENST00000512979 HOXB7P09629 217 aa12.23□□□□□ -0.45
TRIO-220ENST00000512979 TCIRG1Q13488 830 aa12.23□□□□□ -0.45
TRIO-220ENST00000512979 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
TRIO-220ENST00000512979 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
TRIO-220ENST00000512979 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
TRIO-220ENST00000512979 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
TRIO-220ENST00000512979 ABCC4O15439 1325 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 CARNS1A5YM72 827 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 APAF1O14727 1248 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
TRIO-220ENST00000512979 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
TRIO-220ENST00000512979 MORN1Q5T089 497 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
TRIO-220ENST00000512979 MBIPQ9NS73 344 aa12.22□□□□□ -0.45
TRIO-220ENST00000512979 TRMT112Q9UI30 125 aaKnown RBP12.22□□□□□ -0.45
TRIO-220ENST00000512979 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 BRD1O95696 1058 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 EPHX2P34913 555 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 PBX2P40425 430 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 GPC2Q8N158 579 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 PLBD2Q8NHP8 589 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
TRIO-220ENST00000512979 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
TRIO-220ENST00000512979 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
TRIO-220ENST00000512979 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
TRIO-220ENST00000512979 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
TRIO-220ENST00000512979 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 HYPKQ9NX55 129 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 SCN4AP35499 1836 aa12.2□□□□□ -0.46
TRIO-220ENST00000512979 COL4A5P29400 1685 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
TRIO-220ENST00000512979 BBOX1O75936 387 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
TRIO-220ENST00000512979 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
TRIO-220ENST00000512979 KCNA1Q09470 495 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 Q3C1V9 767 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 DDX46Q7L014 1031 aaKnown RBP12.19□□□□□ -0.46
TRIO-220ENST00000512979 ISCA1Q9BUE6 129 aa12.19□□□□□ -0.46
TRIO-220ENST00000512979 MAFBQ9Y5Q3 323 aaPredicted RBP12.19□□□□□ -0.46
TRIO-220ENST00000512979 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 PASKQ96RG2 1323 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 BHMG1C9JSJ3 638 aaPredicted RBP12.18□□□□□ -0.46
TRIO-220ENST00000512979 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 ELL2O00472 640 aaPredicted RBP12.18□□□□□ -0.46
TRIO-220ENST00000512979 GNAI1P63096 354 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 GRAPQ13588 217 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 AOC3Q16853 763 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
TRIO-220ENST00000512979 SP8Q8IXZ3 490 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms