RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ARMT1Q9H993 441 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 RXRAP19793 462 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 UBA7P41226 1012 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 PTH1RQ03431 593 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 SSH2Q76I76 1423 aa15.12■□□□□ 0.01
PCDHA4-202ENST00000512229 CALM1P0DP23 149 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 CALM2P0DP24 149 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 CALM3P0DP25 149 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 SYKP43405 635 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 STX1AQ16623 288 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 TMEM87BQ96K49 555 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 DSCC1Q9BVC3 393 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 ANGEL1Q9UNK9 670 aaKnown RBP15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 GREM2Q9H772 168 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
PCDHA4-202ENST00000512229 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 RBM17Q96I25 401 aaKnown RBP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 SFPQP23246 707 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 PICALMQ13492 652 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 TMEM266Q2M3C6 531 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 ZKSCAN3Q9BRR0 538 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 PUS3Q9BZE2 481 aaKnown RBP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 TECPR2O15040 1411 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 SPTLC2O15270 562 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 UFL1O94874 794 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 BMP15O95972 392 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 POLA2Q14181 598 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 SEC62Q99442 399 aaKnown RBP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 MARCKSP29966 332 aaPredicted RBP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
PCDHA4-202ENST00000512229 PDE8BO95263 885 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 EYA3Q99504 573 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 GPR108Q9NPR9 543 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 ADCY5O95622 1261 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 CPS1P31327 1500 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 PTPN12Q05209 780 aaKnown RBP15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 GPS2Q13227 327 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 WDR66Q8TBY9 1149 aa15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 NCOA5Q9HCD5 579 aaKnown RBP15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
PCDHA4-202ENST00000512229 BRAPQ7Z569 592 aa15.08■□□□□ 0.01
PCDHA4-202ENST00000512229 RTL9Q8NET4 1388 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 PTPRUQ92729 1446 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 IGKV5-2P06315 115 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 ARGLU1Q9NWB6 273 aaPredicted RBP15.08■□□□□ 0
PCDHA4-202ENST00000512229 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 CIAO1O76071 339 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 ISM2Q6H9L7 571 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 CLIP2Q9UDT6 1046 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 GGA1Q9UJY5 639 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 PREX1Q8TCU6 1659 aa15.08■□□□□ 0
PCDHA4-202ENST00000512229 SASH1O94885 1247 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 CUL5Q93034 780 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 FEZ1Q99689 392 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 TRIM75PA6NK02 468 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 NLRP10Q86W26 655 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
PCDHA4-202ENST00000512229 ATG3Q9NT62 314 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 E7EWF7 191 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 DTNBO60941 627 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 FAM173BQ6P4H8 233 aa15.07■□□□□ 0
PCDHA4-202ENST00000512229 EIF5P55010 431 aaKnown RBP15.06■□□□□ 0
PCDHA4-202ENST00000512229 PPP4R3BQ5MIZ7 849 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 MAP4K1Q92918 833 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 CALML3P27482 149 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 ATL3Q6DD88 541 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 MYO1BO43795 1136 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 PRDM1O75626 825 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
PCDHA4-202ENST00000512229 MTX1Q13505 466 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 HEATR3Q7Z4Q2 680 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 TEX11Q8IYF3 940 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
PCDHA4-202ENST00000512229 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 TTC6Q86TZ1 520 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 RASEFQ8IZ41 740 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 DEF6Q9H4E7 631 aa15.06■□□□□ 0
PCDHA4-202ENST00000512229 DEPDC5O75140 1603 aa15.05■□□□□ 0
PCDHA4-202ENST00000512229 SPATA31D1Q6ZQQ2 1576 aa15.05■□□□□ 0
PCDHA4-202ENST00000512229 NEURL4Q96JN8 1562 aa15.05■□□□□ 0
PCDHA4-202ENST00000512229 ERVV-1B6SEH8 477 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms