RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RNF34Q969K3 372 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 BORCS6Q96GS4 357 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 RNPC3Q96LT9 517 aaKnown RBP6□□□□□ -1.45
TRAPPC11-208ENST00000511955 HOMER2Q9NSB8 354 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 USP19O94966 1318 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 TRIM64CA6NLI5 447 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 MYL1P05976 194 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 SRGNP10124 158 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 AMPHP49418 695 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 GEMIN4P57678 1058 aaKnown RBP6□□□□□ -1.45
TRAPPC11-208ENST00000511955 PDE3BQ13370 1112 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 Q3C1V9 767 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 GRAMD1BQ3KR37 738 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 SOGA3Q5TF21 947 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 PDXDC1Q6P996 788 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 SLF2Q8IX21 1173 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 PGBD3Q8N328 593 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 KCNH5Q8NCM2 988 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 CRISPLD2Q9H0B8 497 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 ALG2Q9H553 416 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 GPCPD1Q9NPB8 672 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 ENAMQ9NRM1 1142 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 FAM13BQ9NYF5 915 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 TMCC3Q9ULS5 477 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 INPP5FQ9Y2H2 1132 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 PRKAB1Q9Y478 270 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 EMILIN1Q9Y6C2 1016 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 MAP3K19Q56UN5 1328 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 PABPN1LA6NDY0 278 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 MYL3P08590 195 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 CLCN1P35523 988 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 GPSM2P81274 684 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 TMEM95Q3KNT9 176 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZC3H12AQ5D1E8 599 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 LARP1Q6PKG0 1096 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 TAS1R3Q7RTX0 852 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 LCA5Q86VQ0 697 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 MCF2L2Q86YR7 1114 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 PRR7Q8TB68 274 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 HELQQ8TDG4 1101 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ASB16Q96NS5 453 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 LIMD1Q9UGP4 676 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 SRCAPQ6ZRS2 3230 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 COL22A1Q8NFW1 1626 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 PHRF1Q9P1Y6 1649 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 PPP1R3GB7ZBB8 358 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 PER1O15534 1290 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ANP32AP39687 249 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 FAM161AQ3B820 660 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZNF772Q68DY9 489 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 KSR2Q6VAB6 950 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ANKRD13DQ6ZTN6 518 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 CENPOQ9BU64 300 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 TMUB1Q9BVT8 246 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 DNAJC25Q9H1X3 360 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 RANBP17Q9H2T7 1088 aaKnown RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 ABCA3Q99758 1704 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 OVOS2A0A0J9YW53 1432 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 OVOS2Q6IE36 1432 aa5.99□□□□□ -1.45
TRAPPC11-208ENST00000511955 IPO5O00410 1097 aaKnown RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 NOS2P35228 1153 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 PDIA6Q15084 440 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 FAM98CQ17RN3 349 aaKnown RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 MFSD4BQ5TF39 518 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ALKBH2Q6NS38 261 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ILDR2Q71H61 639 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ARHGEF25Q86VW2 580 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 UNC5CLQ8IV45 518 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 LSM14AQ8ND56 463 aaKnown RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 GOLGA1Q92805 767 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 E2F7Q96AV8 911 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 PDGFDQ9GZP0 370 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 KMT5AQ9NQR1 393 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 TMEM63CQ9P1W3 806 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 BRD4O60885 1362 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 BCL9LQ86UU0 1499 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 TSPAN6O43657 245 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 AP1G2O75843 785 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 HSP90AB1P08238 724 aaKnown RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 FOSL1P15407 271 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 RXRBP28702 533 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZNF131P52739 623 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 SATB1Q01826 763 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 DNAJC21Q5F1R6 531 aaKnown RBP5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 FAM182BQ5T319 152 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 SLC4A10Q6U841 1118 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 C14orf80Q86SX3 495 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ANKRD13BQ86YJ7 626 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 USHBP1Q8N6Y0 703 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 KIF12Q96FN5 646 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 CDHR1Q96JP9 859 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 TAGLN3Q9UI15 199 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 ODF2LQ9ULJ1 636 aa5.98□□□□□ -1.45
TRAPPC11-208ENST00000511955 A0A1W2PRQ8 180 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 GOLGA6L22H0YM25 854 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms