RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 RGPD3A6NKT7 1758 aaPredicted RBP9.74□□□□□ -0.85
SMAD1-209ENST00000511125 RGPD4Q7Z3J3 1758 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
SMAD1-209ENST00000511125 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
SMAD1-209ENST00000511125 ZBTB12Q9Y330 459 aaPredicted RBP9.74□□□□□ -0.85
SMAD1-209ENST00000511125 UQCRFS1P1P0C7P4 283 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
SMAD1-209ENST00000511125 FBXO33Q7Z6M2 555 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 KBTBD3Q8NAB2 608 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 PTH1RQ03431 593 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 MFSD14BQ5SR56 506 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 TTLL5Q6EMB2 1281 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 KIAA0825Q8IV33 1275 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 C7orf43Q8WVR3 580 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 OSBP2Q969R2 916 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 ESYT1Q9BSJ8 1104 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 ZNF532Q9HCE3 1301 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 M0R2C6 588 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 DTNBO60941 627 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 CYP7A1P22680 504 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 TGFB2P61812 414 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 PCDHAC2Q9Y5I4 1007 aa9.73□□□□□ -0.85
SMAD1-209ENST00000511125 C10orf71Q711Q0 1435 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 RBM5P52756 815 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 DYNLL1P63167 89 aaKnown RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 GPR162Q16538 588 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 CCDC93Q567U6 631 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 ADGRA1Q86SQ6 560 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 CASZ1Q86V15 1759 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 PRKAB2O43741 272 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 ECE2O60344 883 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 HAND2P61296 217 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
SMAD1-209ENST00000511125 UPF2Q9HAU5 1272 aaKnown RBP9.72□□□□□ -0.85
SMAD1-209ENST00000511125 SOCS7O14512 581 aa9.71□□□□□ -0.85
SMAD1-209ENST00000511125 DZIP1Q86YF9 867 aaKnown RBP9.71□□□□□ -0.85
SMAD1-209ENST00000511125 CD2APQ9Y5K6 639 aa9.71□□□□□ -0.85
SMAD1-209ENST00000511125 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.85
SMAD1-209ENST00000511125 RNF113AO15541 343 aaKnown RBP9.71□□□□□ -0.86
SMAD1-209ENST00000511125 PDE6AP16499 860 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 C22orf23Q9BZE7 217 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMAD1-209ENST00000511125 DENND2AQ9ULE3 1009 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 CPA1P15085 419 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 MECOMQ03112 1051 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 MAP3K12Q12852 859 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
SMAD1-209ENST00000511125 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-209ENST00000511125 COL1A1P02452 1464 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-209ENST00000511125 AOX1Q06278 1338 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 SMIM22K7EJ46 135 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 YBX3P16989 372 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMAD1-209ENST00000511125 SDR42E1Q8WUS8 393 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 CHMP4CQ96CF2 233 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 EYA3Q99504 573 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 TAOK3Q9H2K8 898 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 SHTN1A0MZ66 631 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 NFKBIEO00221 500 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 MBD4O95243 580 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 LDHBP07195 334 aaKnown RBP9.7□□□□□ -0.86
SMAD1-209ENST00000511125 CACNB3P54284 484 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 NAA16Q6N069 864 aaPredicted RBP9.7□□□□□ -0.86
SMAD1-209ENST00000511125 TDRD7Q8NHU6 1098 aaKnown RBP9.7□□□□□ -0.86
SMAD1-209ENST00000511125 ZNF384Q8TF68 577 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 PALD1Q9ULE6 856 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 TAF6LQ9Y6J9 622 aa9.7□□□□□ -0.86
SMAD1-209ENST00000511125 SGSM2O43147 1006 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 PRELPP51888 382 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 CERS5Q8N5B7 392 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 AIDAQ96BJ3 306 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 TCEANC2Q96MN5 208 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMAD1-209ENST00000511125 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 MAST3O60307 1309 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 COL9A3Q14050 684 aaPredicted RBP9.69□□□□□ -0.86
SMAD1-209ENST00000511125 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
SMAD1-209ENST00000511125 EVX2Q03828 476 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 RTKN2Q8IZC4 609 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 LCORLQ8N3X6 602 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
SMAD1-209ENST00000511125 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
SMAD1-209ENST00000511125 GPAA1O43292 621 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 ADD2P35612 726 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 TMC4Q7Z404 712 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 JDP2Q8WYK2 163 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 IRS2Q9Y4H2 1338 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 CYP2D7A0A087X1C5 515 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms