RNA–Protein interactions for RNA: ENST00000510658.5

SNCAIP-215, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-215ENST00000510658 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
SNCAIP-215ENST00000510658 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
SNCAIP-215ENST00000510658 MYH7P12883 1935 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 STX6O43752 255 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 PDE6AP16499 860 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 UBE3CQ15386 1083 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 TPTE2Q6XPS3 522 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 CHST3Q7LGC8 479 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 MINPP1Q9UNW1 487 aa16.49■□□□□ 0.23
SNCAIP-215ENST00000510658 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
SNCAIP-215ENST00000510658 BRF1Q92994 677 aa16.48■□□□□ 0.23
SNCAIP-215ENST00000510658 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
SNCAIP-215ENST00000510658 TRIM37O94972 964 aa16.48■□□□□ 0.23
SNCAIP-215ENST00000510658 GYG1P46976 350 aa16.48■□□□□ 0.23
SNCAIP-215ENST00000510658 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 FGD1P98174 961 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
SNCAIP-215ENST00000510658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 IMMTQ16891 758 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 CTNNA3Q9UI47 895 aa16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 C4AP0C0L4 1744 aa16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 NPHP1O15259 732 aa16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 NFIXQ14938 502 aa16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 GDPD2Q9HCC8 539 aa16.46■□□□□ 0.23
SNCAIP-215ENST00000510658 NCLP19338 710 aaKnown RBP16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 GPT2Q8TD30 523 aa16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
SNCAIP-215ENST00000510658 APPP05067 770 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 KLRK1P26718 216 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 TM4SF1P30408 202 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 AIDAQ96BJ3 306 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 ZNF213O14771 459 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 JAK2O60674 1132 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 F13A1P00488 732 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 SCRN1Q12765 414 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
SNCAIP-215ENST00000510658 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 VPS37CA5D8V6 355 aaPredicted RBP16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 NBPF3Q9H094 633 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 GPHNQ9NQX3 736 aaPredicted RBP16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 DENND2AQ9ULE3 1009 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 FSD2A1L4K1 749 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 CARMIL3Q8ND23 1372 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 AGXT2Q9BYV1 514 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
SNCAIP-215ENST00000510658 A0A1B0GUL6 1792 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 GOLGA6L3A6NEY3 463 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 MBD4O95243 580 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
SNCAIP-215ENST00000510658 TCHHQ07283 1943 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 GYS1P13807 737 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 ADRA2BP18089 450 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 GAS2L3Q86XJ1 694 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 CNBD1Q8NA66 436 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 CNPY2Q9Y2B0 182 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 PROM2Q8N271 834 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 MIGA1Q8NAN2 632 aa16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-215ENST00000510658 PRKAB2O43741 272 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 PFKFB2O60825 505 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 LCORLQ8N3X6 602 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 GNL3LQ9NVN8 582 aaKnown RBP16.4■□□□□ 0.22
SNCAIP-215ENST00000510658 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms