RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 FRMD6Q96NE9 622 aa11.82□□□□□ -0.52
TRAPPC11-206ENST00000509857 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
TRAPPC11-206ENST00000509857 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
TRAPPC11-206ENST00000509857 DLL1O00548 723 aa11.81□□□□□ -0.52
TRAPPC11-206ENST00000509857 SRCIN1Q9C0H9 1055 aa11.81□□□□□ -0.52
TRAPPC11-206ENST00000509857 FSCN2O14926 492 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 GDF11O95390 407 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 TXNDC11Q6PKC3 985 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 TMEM151AQ8N4L1 468 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
TRAPPC11-206ENST00000509857 GNA15P30679 374 aa11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 NXPE4Q6UWF7 544 aa11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 CLEC4MQ9H2X3 399 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 OSGEPQ9NPF4 335 aa11.79□□□□□ -0.52
TRAPPC11-206ENST00000509857 ESRRAP11474 423 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 XRCC5P13010 732 aaKnown RBP11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 IKBKEQ14164 716 aa11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 RPS26P11Q5JNZ5 115 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 KLHL23Q8NBE8 558 aa11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 GALNT11Q8NCW6 608 aa11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
TRAPPC11-206ENST00000509857 SELPP16109 830 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 CDC25BP30305 580 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 GRIK4Q16099 956 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 NACC1Q96RE7 527 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 C12orf49Q9H741 205 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
TRAPPC11-206ENST00000509857 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 PCDH1Q08174 1060 aa11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 CARD10Q9BWT7 1032 aa11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 ZFYVE1Q9HBF4 777 aa11.76□□□□□ -0.53
TRAPPC11-206ENST00000509857 APBA3O96018 575 aa11.75□□□□□ -0.53
TRAPPC11-206ENST00000509857 C3orf58Q8NDZ4 430 aa11.75□□□□□ -0.53
TRAPPC11-206ENST00000509857 B3GALT4O96024 378 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 CD68P34810 354 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 FCGRTP55899 365 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 C19orf57Q0VDD7 668 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 ZNF423Q2M1K9 1284 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 FOXD4L6Q3SYB3 417 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 FOXD4L3Q6VB84 417 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 BCL2L13Q9BXK5 485 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 FAM8A1Q9UBU6 413 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
TRAPPC11-206ENST00000509857 C9orf172C9J069 976 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 ITGB2P05107 769 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 GSTT1P30711 240 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 DAB2P98082 770 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 TAGLNQ01995 201 aaKnown RBP11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 SUZ12Q15022 739 aaKnown RBP11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 HGSNATQ68CP4 663 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 CD163Q86VB7 1156 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 KLHDC7BQ96G42 594 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 DCAF1Q9Y4B6 1507 aa11.73□□□□□ -0.53
TRAPPC11-206ENST00000509857 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 CHRNA4P43681 627 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 ARL4DP49703 201 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 DTHD1Q6ZMT9 781 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 AK5Q9Y6K8 562 aa11.72□□□□□ -0.53
TRAPPC11-206ENST00000509857 ADAM11O75078 769 aa11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 NRG1Q02297 640 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.53
TRAPPC11-206ENST00000509857 C1QTNF9BB2RNN3 333 aa11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 EIF4BP23588 611 aaKnown RBP11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 ADGRE1Q14246 886 aa11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 CCDC9Q9Y3X0 531 aaKnown RBP11.7□□□□□ -0.54
TRAPPC11-206ENST00000509857 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
TRAPPC11-206ENST00000509857 NRSN2Q9GZP1 204 aa11.69□□□□□ -0.54
TRAPPC11-206ENST00000509857 USP17L7P0C7H9 530 aa11.68□□□□□ -0.54
TRAPPC11-206ENST00000509857 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC11-206ENST00000509857 PSMD2Q13200 908 aa11.68□□□□□ -0.54
TRAPPC11-206ENST00000509857 MBTPS1Q14703 1052 aa11.68□□□□□ -0.54
TRAPPC11-206ENST00000509857 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
TRAPPC11-206ENST00000509857 DDX3YO15523 660 aaKnown RBP11.67□□□□□ -0.54
TRAPPC11-206ENST00000509857 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
TRAPPC11-206ENST00000509857 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 WISP1O95388 367 aa11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 DDX54Q8TDD1 881 aaKnown RBP11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 USP21Q9UK80 565 aa11.66□□□□□ -0.54
TRAPPC11-206ENST00000509857 F8W735 103 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms