RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 ARAP2Q8WZ64 1704 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 IL1R1P14778 569 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.293e-9■■□□□ 12.1
CYSTM1-204ENST00000509789 MCAMP43121 646 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
CYSTM1-204ENST00000509789 TRIM6-TRIM34B2RNG4 842 aa16.84■□□□□ 0.29
CYSTM1-204ENST00000509789 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
CYSTM1-204ENST00000509789 SCARF1Q14162 830 aa16.84■□□□□ 0.29
CYSTM1-204ENST00000509789 BMP2KLQ5H9B9 411 aa16.84■□□□□ 0.29
CYSTM1-204ENST00000509789 ECE2O60344 883 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 ZAP70P43403 619 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 RASSF7Q02833 373 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 PDS5AQ29RF7 1337 aaKnown RBP16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 NIM1KQ8IY84 436 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 JDP2Q8WYK2 163 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
CYSTM1-204ENST00000509789 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 GOLIM4O00461 696 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 WDR66Q8TBY9 1149 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 NDUFB9Q9Y6M9 179 aa16.82■□□□□ 0.28
CYSTM1-204ENST00000509789 SDSP20132 328 aa16.81■□□□□ 0.28
CYSTM1-204ENST00000509789 LMNB1P20700 586 aa16.81■□□□□ 0.28
CYSTM1-204ENST00000509789 ZNRF3Q9ULT6 936 aa16.81■□□□□ 0.28
CYSTM1-204ENST00000509789 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 GTF2IP78347 998 aa16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 TTLL5Q6EMB2 1281 aa16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 EDC3Q96F86 508 aaKnown RBP16.8■□□□□ 0.28
CYSTM1-204ENST00000509789 USP17L3A6NCW0 530 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 USP17L4A6NCW7 530 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 TBC1D9Q6ZT07 1266 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 USP17L1Q7RTZ2 530 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
CYSTM1-204ENST00000509789 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
CYSTM1-204ENST00000509789 SALL1Q9NSC2 1324 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 AKAP11Q9UKA4 1901 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 YDJCA8MPS7 323 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 PRELPP51888 382 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 MAP3K12Q12852 859 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 KCNQ5Q9NR82 932 aa16.77■□□□□ 0.28
CYSTM1-204ENST00000509789 COL1A1P02452 1464 aaPredicted RBP16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 HIP1O00291 1037 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 IGSF3O75054 1194 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 RAD17O75943 681 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 EIF6P56537 245 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 TNIP1Q15025 636 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
CYSTM1-204ENST00000509789 CHD4Q14839 1912 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 CIAPIN1Q6FI81 312 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
CYSTM1-204ENST00000509789 FZD9O00144 591 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 CDC45O75419 566 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 VIL1P09327 827 aaKnown RBP16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 CXCL9Q07325 125 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
CYSTM1-204ENST00000509789 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms