RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 ETFBKMTQ8IXQ9 262 aa6.32□□□□□ -1.4
OTUD4-207ENST00000509517 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
OTUD4-207ENST00000509517 SSFA2P28290 1259 aa6.31□□□□□ -1.4
OTUD4-207ENST00000509517 COX20Q5RI15 118 aa6.31□□□□□ -1.4
OTUD4-207ENST00000509517 RNF208Q9H0X6 261 aa6.31□□□□□ -1.4
OTUD4-207ENST00000509517 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
OTUD4-207ENST00000509517 CYP26A1O43174 497 aa6.3□□□□□ -1.4
OTUD4-207ENST00000509517 SMNDC1O75940 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
OTUD4-207ENST00000509517 RXRBP28702 533 aa6.3□□□□□ -1.4
OTUD4-207ENST00000509517 HYAL2Q12891 473 aa6.3□□□□□ -1.4
OTUD4-207ENST00000509517 FLCNQ8NFG4 579 aa6.3□□□□□ -1.4
OTUD4-207ENST00000509517 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
OTUD4-207ENST00000509517 NFKBIBQ15653 356 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 PHLDB3Q6NSJ2 640 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 FDX2Q6P4F2 183 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 WFDC3Q8IUB2 231 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 MKNK1Q9BUB5 465 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 PBX4Q9BYU1 374 aa6.29□□□□□ -1.4
OTUD4-207ENST00000509517 BSDC1Q9NW68 430 aaPredicted RBP6.29□□□□□ -1.4
OTUD4-207ENST00000509517 FAM170BA6NMN3 283 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 GAS2O43903 313 aaKnown RBP6.28□□□□□ -1.4
OTUD4-207ENST00000509517 DLGAP3O95886 979 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 DRD2P14416 443 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 ACPPP15309 386 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 B4GALNT3Q6L9W6 998 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 CEP120Q8N960 986 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 FBLIM1Q8WUP2 373 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 ADAM19Q9H013 955 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 SAP130Q9H0E3 1048 aa6.28□□□□□ -1.4
OTUD4-207ENST00000509517 ZC3H7BQ9UGR2 993 aaKnown RBP6.28□□□□□ -1.4
OTUD4-207ENST00000509517 UBAP1LF5GYI3 381 aa6.27□□□□□ -1.41
OTUD4-207ENST00000509517 SCNN1AP37088 669 aa6.27□□□□□ -1.41
OTUD4-207ENST00000509517 ZNF574Q6ZN55 896 aaPredicted RBP6.27□□□□□ -1.41
OTUD4-207ENST00000509517 C12orf50Q8NA57 414 aaPredicted RBP6.27□□□□□ -1.41
OTUD4-207ENST00000509517 GIMAP7Q8NHV1 300 aa6.27□□□□□ -1.41
OTUD4-207ENST00000509517 GATA6Q92908 595 aa6.27□□□□□ -1.41
OTUD4-207ENST00000509517 SPACA7Q96KW9 195 aa6.27□□□□□ -1.41
OTUD4-207ENST00000509517 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 TRPA1O75762 1119 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 KIF4AO95239 1232 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 SPRED2Q7Z698 418 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 SLC7A3Q8WY07 619 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
OTUD4-207ENST00000509517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.26□□□□□ -1.41
OTUD4-207ENST00000509517 H3BRJ5 948 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 TIAF1O95411 115 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 PTPRAP18433 802 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 TBC1D32Q96NH3 1257 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 PRKAG2Q9UGJ0 569 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 SEPT3Q9UH03 358 aa6.25□□□□□ -1.41
OTUD4-207ENST00000509517 NFKBIEO00221 500 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 FARP2O94887 1054 aaPredicted RBP6.24□□□□□ -1.41
OTUD4-207ENST00000509517 BRD1O95696 1058 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 PIP4K2BP78356 416 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 NAA30Q147X3 362 aaPredicted RBP6.24□□□□□ -1.41
OTUD4-207ENST00000509517 ZNF792Q3KQV3 632 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 C16orf46Q6P387 395 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 ZAR1Q86SH2 424 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 CILP2Q8IUL8 1156 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 HHIPQ96QV1 700 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 LRRC4CQ9HCJ2 640 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 OSGEPQ9NPF4 335 aa6.24□□□□□ -1.41
OTUD4-207ENST00000509517 SMG8Q8ND04 991 aaKnown RBP6.23□□□□□ -1.41
OTUD4-207ENST00000509517 SOX1O00570 391 aaPredicted RBP6.22□□□□□ -1.41
OTUD4-207ENST00000509517 TNFRSF10BO14763 440 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 PDIA4P13667 645 aaKnown RBP6.22□□□□□ -1.41
OTUD4-207ENST00000509517 BNIP3Q12983 259 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 CPSF6Q16630 551 aaKnown RBP eCLIP6.22□□□□□ -1.41
OTUD4-207ENST00000509517 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
OTUD4-207ENST00000509517 NUTM2GQ5VZR2 741 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 PAOXQ6QHF9 649 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 TXNDC2Q86VQ3 553 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 NCAPG2Q86XI2 1143 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 BCL7CQ8WUZ0 217 aaPredicted RBP6.22□□□□□ -1.41
OTUD4-207ENST00000509517 CNTN3Q9P232 1028 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 KANSL3Q9P2N6 904 aa6.22□□□□□ -1.41
OTUD4-207ENST00000509517 HOMEZQ8IX15 550 aa6.21□□□□□ -1.42
OTUD4-207ENST00000509517 HELQQ8TDG4 1101 aa6.21□□□□□ -1.42
OTUD4-207ENST00000509517 GTF3C2Q8WUA4 911 aaPredicted RBP6.21□□□□□ -1.42
OTUD4-207ENST00000509517 WNT8BQ93098 351 aa6.21□□□□□ -1.42
OTUD4-207ENST00000509517 METTL22Q9BUU2 404 aaPredicted RBP6.21□□□□□ -1.42
OTUD4-207ENST00000509517 MTMR7Q9Y216 660 aa6.21□□□□□ -1.42
OTUD4-207ENST00000509517 USP11P51784 963 aa6.2□□□□□ -1.42
OTUD4-207ENST00000509517 MESP2Q0VG99 397 aa6.2□□□□□ -1.42
OTUD4-207ENST00000509517 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
OTUD4-207ENST00000509517 ZNF765Q7L2R6 523 aa6.2□□□□□ -1.42
OTUD4-207ENST00000509517 C2CD4AQ8NCU7 369 aaPredicted RBP6.2□□□□□ -1.42
OTUD4-207ENST00000509517 GLIS3Q8NEA6 775 aa6.2□□□□□ -1.42
OTUD4-207ENST00000509517 LOC100289279A0A1B0GTE1 492 aa6.19□□□□□ -1.42
OTUD4-207ENST00000509517 ZBTB39O15060 712 aa6.19□□□□□ -1.42
OTUD4-207ENST00000509517 BRD2P25440 801 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms