RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 ABCF2Q9UG63 623 aa17.67■□□□□ 0.42
PHF3-209ENST00000509330 XRCC6P12956 609 aaKnown RBP eCLIP17.66■□□□□ 0.427e-13■■■■■ 31.2
PHF3-209ENST00000509330 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
PHF3-209ENST00000509330 AK7Q96M32 723 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 JAG2Q9Y219 1238 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
PHF3-209ENST00000509330 RFC4P35249 363 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
PHF3-209ENST00000509330 SPEF2Q9C093 1822 aa17.66■□□□□ 0.42
PHF3-209ENST00000509330 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 MIGA1Q8NAN2 632 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 BTAF1O14981 1849 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 F13A1P00488 732 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 KLRK1P26718 216 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
PHF3-209ENST00000509330 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
PHF3-209ENST00000509330 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 TRPC5Q9UL62 973 aaPredicted RBP17.65■□□□□ 0.42
PHF3-209ENST00000509330 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
PHF3-209ENST00000509330 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.42
PHF3-209ENST00000509330 AIDAQ96BJ3 306 aa17.64■□□□□ 0.42
PHF3-209ENST00000509330 TRIM37O94972 964 aa17.64■□□□□ 0.41
PHF3-209ENST00000509330 PTMSP20962 102 aa17.64■□□□□ 0.41
PHF3-209ENST00000509330 DNM1Q05193 864 aaKnown RBP17.64■□□□□ 0.41
PHF3-209ENST00000509330 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
PHF3-209ENST00000509330 NKX2-3Q8TAU0 364 aa17.64■□□□□ 0.41
PHF3-209ENST00000509330 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
PHF3-209ENST00000509330 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
PHF3-209ENST00000509330 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
PHF3-209ENST00000509330 MYO5AQ9Y4I1 1855 aaKnown RBP17.64■□□□□ 0.41
PHF3-209ENST00000509330 SCRN1Q12765 414 aa17.64■□□□□ 0.41
PHF3-209ENST00000509330 TTF1Q15361 905 aaPredicted RBP17.63■□□□□ 0.41
PHF3-209ENST00000509330 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
PHF3-209ENST00000509330 LRP2BPQ9P2M1 347 aa17.63■□□□□ 0.41
PHF3-209ENST00000509330 MBD4O95243 580 aa17.63■□□□□ 0.41
PHF3-209ENST00000509330 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
PHF3-209ENST00000509330 TMEM63CQ9P1W3 806 aa17.63■□□□□ 0.41
PHF3-209ENST00000509330 FSD2A1L4K1 749 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 ZNF213O14771 459 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 PRKAB2O43741 272 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 MINPP1Q9UNW1 487 aa17.62■□□□□ 0.41
PHF3-209ENST00000509330 KDM4AO75164 1064 aa17.61■□□□□ 0.41
PHF3-209ENST00000509330 L1TD1Q5T7N2 865 aaKnown RBP17.61■□□□□ 0.41
PHF3-209ENST00000509330 ZSCAN25Q6NSZ9 544 aa17.61■□□□□ 0.41
PHF3-209ENST00000509330 GRPEL1Q9HAV7 217 aa17.61■□□□□ 0.41
PHF3-209ENST00000509330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
PHF3-209ENST00000509330 SYCE3A1L190 88 aa17.61■□□□□ 0.41
PHF3-209ENST00000509330 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
PHF3-209ENST00000509330 RREB1Q92766 1687 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
PHF3-209ENST00000509330 TPTE2Q6XPS3 522 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
PHF3-209ENST00000509330 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
PHF3-209ENST00000509330 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
PHF3-209ENST00000509330 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
PHF3-209ENST00000509330 TCHHQ07283 1943 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 PRC1O43663 620 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 RXRAP19793 462 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
PHF3-209ENST00000509330 LRP5O75197 1615 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
PHF3-209ENST00000509330 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 NFIXQ14938 502 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 FAM184AQ8NB25 1140 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 NBPF3Q9H094 633 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 THSD7AQ9UPZ6 1657 aa17.59■□□□□ 0.41
PHF3-209ENST00000509330 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.41
PHF3-209ENST00000509330 CHAF1AQ13111 956 aaPredicted RBP17.58■□□□□ 0.41
PHF3-209ENST00000509330 UBE3CQ15386 1083 aa17.58■□□□□ 0.41
PHF3-209ENST00000509330 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.41
PHF3-209ENST00000509330 TOMM22Q9NS69 142 aa17.58■□□□□ 0.41
PHF3-209ENST00000509330 BSDC1Q9NW68 430 aaPredicted RBP17.58■□□□□ 0.41
PHF3-209ENST00000509330 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.41
PHF3-209ENST00000509330 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.4
PHF3-209ENST00000509330 STRBPQ96SI9 672 aaKnown RBP17.58■□□□□ 0.4
PHF3-209ENST00000509330 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
PHF3-209ENST00000509330 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.4
PHF3-209ENST00000509330 B4E1Z4 1266 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
PHF3-209ENST00000509330 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 H3BQV1 296 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 SMIM22K7EJ46 135 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 ANTXR2P58335 489 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms