RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TFCP2L1Q9NZI6 479 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 MAST3O60307 1309 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 SCARF1Q14162 830 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 MTMR6Q9Y217 621 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
PRPF40B-203ENST00000508736 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 SLC5A1P13866 664 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 MCAMP43121 646 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 ZAP70P43403 619 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 CCDC102BQ68D86 513 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 APPBP2Q92624 585 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
PRPF40B-203ENST00000508736 FAM177BA6PVY3 158 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 CHGBP05060 677 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 CYP21A2P08686 494 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 TRAPPC3LQ5T215 181 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 FIBPO43427 364 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 HSPD1P10809 573 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 ERFEQ4G0M1 354 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
PRPF40B-203ENST00000508736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 ZPR1O75312 459 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 MYH7P12883 1935 aa13.66□□□□□ -0.22
PRPF40B-203ENST00000508736 ST3GAL1Q11201 340 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 M0R2C6 588 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 ADRA2BP18089 450 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 RFC4P35249 363 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 ADD2P35612 726 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 PHKA1P46020 1223 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 KRT85P78386 507 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 TAF6LQ9Y6J9 622 aa13.65□□□□□ -0.22
PRPF40B-203ENST00000508736 DNM1Q05193 864 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 CHRNDQ07001 517 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 TPTE2Q6XPS3 522 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 ANKRD18AQ8IVF6 992 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 CCDC39Q9UFE4 941 aa13.64□□□□□ -0.23
PRPF40B-203ENST00000508736 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 SPATA5Q8NB90 893 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 SRP68Q9UHB9 627 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 ELP1O95163 1332 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 DOCK2Q92608 1830 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 CASZ1Q86V15 1759 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 COL23A1Q86Y22 540 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 FBXL16Q8N461 479 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
PRPF40B-203ENST00000508736 ZBTB22O15209 634 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 MCM5P33992 734 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 FGD1P98174 961 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 CHMP4CQ96CF2 233 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 NAP1L5Q96NT1 182 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
PRPF40B-203ENST00000508736 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms