RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 FGFR2P21802 821 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 TAF1P21675 1872 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 ATP5JP18859 108 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
PROM1-207ENST00000508167 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 LAMA4Q16363 1823 aa13.25□□□□□ -0.29
PROM1-207ENST00000508167 IARSP41252 1262 aaKnown RBP13.24□□□□□ -0.29
PROM1-207ENST00000508167 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
PROM1-207ENST00000508167 BECN1Q14457 450 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
PROM1-207ENST00000508167 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 RAD17O75943 681 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 CHMLP26374 656 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 LRP5O75197 1615 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 CYP2E1P05181 493 aaPredicted RBP13.24□□□□□ -0.29
PROM1-207ENST00000508167 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
PROM1-207ENST00000508167 MAP3K12Q12852 859 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 RASGRF1Q13972 1273 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 ZNF609O15014 1411 aa13.24□□□□□ -0.29
PROM1-207ENST00000508167 ECE2O60344 883 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 TTF1Q15361 905 aaPredicted RBP13.23□□□□□ -0.29
PROM1-207ENST00000508167 NOL10Q9BSC4 688 aaKnown RBP13.23□□□□□ -0.29
PROM1-207ENST00000508167 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 EVI5LQ96CN4 794 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 MCAMP43121 646 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 SCARF1Q14162 830 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 WDR66Q8TBY9 1149 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
PROM1-207ENST00000508167 ARAP2Q8WZ64 1704 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 LAMB2P55268 1798 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 CLEC17AQ6ZS10 378 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 PODNQ7Z5L7 613 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 SPTY2D1Q68D10 685 aaPredicted RBP13.22□□□□□ -0.29
PROM1-207ENST00000508167 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 ZGPATQ8N5A5 531 aaKnown RBP13.22□□□□□ -0.29
PROM1-207ENST00000508167 PSMD1Q99460 953 aa13.22□□□□□ -0.29
PROM1-207ENST00000508167 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
PROM1-207ENST00000508167 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
PROM1-207ENST00000508167 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
PROM1-207ENST00000508167 MED23Q9ULK4 1368 aa13.21□□□□□ -0.29
PROM1-207ENST00000508167 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
PROM1-207ENST00000508167 HAUS7Q99871 368 aa13.21□□□□□ -0.29
PROM1-207ENST00000508167 SEMA3EO15041 775 aa13.21□□□□□ -0.3
PROM1-207ENST00000508167 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.3
PROM1-207ENST00000508167 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.3
PROM1-207ENST00000508167 LMNB1P20700 586 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 ANKRD31Q8N7Z5 1873 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 USP17L3A6NCW0 530 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 USP17L4A6NCW7 530 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
PROM1-207ENST00000508167 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
PROM1-207ENST00000508167 USP17L1Q7RTZ2 530 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 COL4A1P02462 1669 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 NFKBIEO00221 500 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
PROM1-207ENST00000508167 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 APPP05067 770 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 MAGEB6Q8N7X4 407 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 CYP7A1P22680 504 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
PROM1-207ENST00000508167 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
PROM1-207ENST00000508167 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
PROM1-207ENST00000508167 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
PROM1-207ENST00000508167 SPRYD3Q8NCJ5 442 aa13.19□□□□□ -0.3
PROM1-207ENST00000508167 HIP1O00291 1037 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
PROM1-207ENST00000508167 TNIP1Q15025 636 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 SCNN1DP51172 638 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
PROM1-207ENST00000508167 KCNQ5Q9NR82 932 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
PROM1-207ENST00000508167 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 LDHCP07864 332 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 PRDX5P30044 214 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
PROM1-207ENST00000508167 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms