RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 KCNB2Q92953 911 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 PARP2Q9UGN5 583 aa6.9□□□□□ -1.3
CLDND1-212ENST00000506885 MPSTP25325 297 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 ZNF76P36508 570 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 CHRNA4P43681 627 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 MLLT1Q03111 559 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-212ENST00000506885 DNM1Q05193 864 aaKnown RBP6.89□□□□□ -1.31
CLDND1-212ENST00000506885 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLDND1-212ENST00000506885 MSL1Q68DK7 614 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-212ENST00000506885 EDEM1Q92611 657 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 SMG9Q9H0W8 520 aaKnown RBP6.89□□□□□ -1.31
CLDND1-212ENST00000506885 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 SUGT1Q9Y2Z0 365 aa6.89□□□□□ -1.31
CLDND1-212ENST00000506885 LOC102724159A0A0B4J2E5 919 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 C9orf172C9J069 976 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 TREHO43280 583 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 SORBS3O60504 671 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 PDGFAP04085 211 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 LDHBP07195 334 aaKnown RBP6.88□□□□□ -1.31
CLDND1-212ENST00000506885 ELNP15502 786 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-212ENST00000506885 TNNI2P48788 182 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 RBL2Q08999 1139 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 PWP2Q15269 919 aaKnown RBP6.88□□□□□ -1.31
CLDND1-212ENST00000506885 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 CCDC181Q5TID7 509 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 WFDC8Q8IUA0 241 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 PLD4Q96BZ4 506 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 MUC3BQ9H195 1237 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
CLDND1-212ENST00000506885 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
CLDND1-212ENST00000506885 PRPF40AO75400 957 aaKnown RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 NRG1Q02297 640 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 DOC2BQ14184 412 aa6.87□□□□□ -1.31
CLDND1-212ENST00000506885 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
CLDND1-212ENST00000506885 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
CLDND1-212ENST00000506885 ATCAYQ86WG3 371 aa6.87□□□□□ -1.31
CLDND1-212ENST00000506885 NSUN5Q96P11 429 aaKnown RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-212ENST00000506885 J3QW42 95 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 NDUFB5O43674 189 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLDND1-212ENST00000506885 ITGB7P26010 798 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 ANAPC15P60006 121 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 PSMD2Q13200 908 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 GRIK5Q16478 980 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 ZNF746Q6NUN9 644 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-212ENST00000506885 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-212ENST00000506885 OSBPL2Q9H1P3 480 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
CLDND1-212ENST00000506885 FAM177BA6PVY3 158 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 TPD52L2O43399 206 aaKnown RBP6.85□□□□□ -1.31
CLDND1-212ENST00000506885 KIF4AO95239 1232 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 GATA4P43694 442 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 MAPK8P45983 427 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 DAB2P98082 770 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 ARID5AQ03989 594 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 FBXO11Q86XK2 927 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 FMR1NBQ8N0W7 255 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-212ENST00000506885 BRINP2Q9C0B6 783 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
CLDND1-212ENST00000506885 NOP58Q9Y2X3 529 aaKnown RBP6.85□□□□□ -1.31
CLDND1-212ENST00000506885 CLSTN1O94985 981 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 CES1P23141 567 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 PDE3BQ13370 1112 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 ZCRB1Q8TBF4 217 aaKnown RBP6.84□□□□□ -1.31
CLDND1-212ENST00000506885 LENG1Q96BZ8 264 aaPredicted RBP6.84□□□□□ -1.31
CLDND1-212ENST00000506885 TMEM63CQ9P1W3 806 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 INPP5FQ9Y2H2 1132 aa6.84□□□□□ -1.31
CLDND1-212ENST00000506885 NEFLP07196 543 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 HSD3B2P26439 372 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 DSC3Q14574 896 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 BMS1Q14692 1282 aaKnown RBP6.83□□□□□ -1.32
CLDND1-212ENST00000506885 GORABQ5T7V8 394 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 RNF187Q5TA31 235 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-212ENST00000506885 TMED8Q6PL24 325 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-212ENST00000506885 IL22RA1Q8N6P7 574 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms