RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NDFIP2Q9NV92 336 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 ATXN7L1Q9ULK2 861 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 PHF24Q9UPV7 400 aa4.84□□□□□ -1.63
TRAPPC11-205ENST00000506426 K7ELQ4 463 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 FGRP09769 529 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 PCSK7Q16549 785 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 FAM182BQ5T319 152 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 BEND7Q8N7W2 519 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 PMFBP1Q8TBY8 1022 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 ABHD17AQ96GS6 310 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 NSUN5Q96P11 429 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 DZANK1Q9NVP4 752 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 ADAMTS1Q9UHI8 967 aa4.83□□□□□ -1.64
TRAPPC11-205ENST00000506426 CADPSQ9ULU8 1353 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 A0A096LPE4 126 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 LOC102724428A0A0B4J2F2 783 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 A0A1W2PPZ6 126 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 FBXO24O75426 580 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 SSBP05455 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 BCRP11274 1271 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 HSP90B1P14625 803 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 ACPPP15309 386 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 CD33P20138 364 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 ITPKAP23677 461 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 BAG6P46379 1132 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 GRIA4P48058 902 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 SIK1P57059 783 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 GPLD1P80108 840 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 MAP3K11Q16584 847 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 CCDC144BQ3MJ40 725 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 RPS26P11Q5JNZ5 115 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 FOXR1Q6PIV2 292 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 TPTE2Q6XPS3 522 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 TMEM102Q8N9M5 508 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 TRPM4Q8TD43 1214 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 ZNF296Q8WUU4 475 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 NXPE3Q969Y0 559 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 GTPBP3Q969Y2 492 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 TRIM56Q9BRZ2 755 aaKnown RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 BHLHE41Q9C0J9 482 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 RBSNQ9H1K0 784 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 ENAMQ9NRM1 1142 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 MBIPQ9NS73 344 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 PRR12Q9ULL5 1215 aa4.82□□□□□ -1.64
TRAPPC11-205ENST00000506426 F6X3S4 739 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 NFKBIEO00221 500 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 TRPA1O75762 1119 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 GHRHP01286 108 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 FGFR3P22607 806 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 LIG3P49916 1009 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 SPRED3Q2MJR0 410 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 GIMAP6Q6P9H5 292 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 RAB44Q7Z6P3 723 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 PHC3Q8NDX5 983 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 ASAP3Q8TDY4 903 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 EAF1Q96JC9 268 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 NECAB3Q96P71 396 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 TRERF1Q96PN7 1200 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 NT5C1AQ9BXI3 368 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 PBX4Q9BYU1 374 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 HCN2Q9UL51 889 aa4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 SUPT16HQ9Y5B9 1047 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-205ENST00000506426 METTL12A8MUP2 240 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 J3QW42 95 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 PF4P02776 101 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 CELA3AP09093 270 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 LMNB1P20700 586 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 COL8A1P27658 744 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 NASPP49321 788 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 LMNB2Q03252 620 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 COL9A2Q14055 689 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 SNAP47Q5SQN1 464 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 TTBK2Q6IQ55 1244 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 FBXL19Q6PCT2 694 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 C1orf229Q6ZS94 237 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 CKAP2LQ8IYA6 745 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 RHOVQ96L33 236 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 HHIPQ96QV1 700 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 RASSF4Q9H2L5 321 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 IGFLR1Q9H665 355 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 SEC31BQ9NQW1 1179 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 KCNQ5Q9NR82 932 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 GPN3Q9UHW5 284 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 STRIP2Q9ULQ0 834 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 EFR3BQ9Y2G0 817 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 SAMM50Q9Y512 469 aa4.8□□□□□ -1.64
TRAPPC11-205ENST00000506426 ZBTB42B2RXF5 422 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 SHISA8B8ZZ34 492 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 GREM1O60565 184 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 SMNDC1O75940 238 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 ITGB7P26010 798 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 RPS26P62854 115 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 MLLT1Q03111 559 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 FAM160A1Q05DH4 1040 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 PPP2R3AQ06190 1150 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms