RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
CHD1-204ENST00000505982 MED26O95402 600 aa9.65□□□□□ -0.86
CHD1-204ENST00000505982 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
CHD1-204ENST00000505982 GRIK1P39086 918 aa9.65□□□□□ -0.86
CHD1-204ENST00000505982 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.86
CHD1-204ENST00000505982 FAM117BQ6P1L5 589 aa9.65□□□□□ -0.86
CHD1-204ENST00000505982 ARMC10Q8N2F6 343 aa9.65□□□□□ -0.86
CHD1-204ENST00000505982 WISP1O95388 367 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 USP5P45974 858 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
CHD1-204ENST00000505982 ATP11AP98196 1134 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 NFIAQ12857 509 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 INTS5Q6P9B9 1019 aaKnown RBP9.64□□□□□ -0.87
CHD1-204ENST00000505982 KLHL23Q8NBE8 558 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 UTP4Q969X6 686 aaKnown RBP9.64□□□□□ -0.87
CHD1-204ENST00000505982 KRTAP9-9Q9BYP9 154 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 KRTAP9-4Q9BYQ2 154 aa9.64□□□□□ -0.87
CHD1-204ENST00000505982 ATP2B2Q01814 1243 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD1-204ENST00000505982 EHHADHQ08426 723 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 COL13A1Q5TAT6 717 aaPredicted RBP9.63□□□□□ -0.87
CHD1-204ENST00000505982 TXNDC11Q6PKC3 985 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
CHD1-204ENST00000505982 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 GPR182O15218 404 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 PDGFAP04085 211 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CHD1-204ENST00000505982 FGD1P98174 961 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 DUOXA2Q1HG44 320 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 NIF3L1Q9GZT8 377 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 KCNK4Q9NYG8 393 aa9.62□□□□□ -0.87
CHD1-204ENST00000505982 OAS3Q9Y6K5 1087 aaKnown RBP9.62□□□□□ -0.87
CHD1-204ENST00000505982 FSCN2O14926 492 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
CHD1-204ENST00000505982 CDC25BP30305 580 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 XPCQ01831 940 aaPredicted RBP9.61□□□□□ -0.87
CHD1-204ENST00000505982 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 RNF43Q68DV7 783 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 FAM46AQ96IP4 442 aaKnown RBP9.61□□□□□ -0.87
CHD1-204ENST00000505982 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 C7orf69Q9H7B7 122 aa9.61□□□□□ -0.87
CHD1-204ENST00000505982 KIF4AO95239 1232 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 DSC3Q14574 896 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 KIAA1211Q6ZU35 1233 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 TRIM42Q8IWZ5 723 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 GJD3Q8N144 294 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 NUDT16Q96DE0 195 aaKnown RBP9.6□□□□□ -0.87
CHD1-204ENST00000505982 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 DBNDD2Q9BQY9 259 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 CARD10Q9BWT7 1032 aa9.6□□□□□ -0.87
CHD1-204ENST00000505982 TCF3P15923 654 aa9.59□□□□□ -0.87
CHD1-204ENST00000505982 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
CHD1-204ENST00000505982 ALKBH8Q96BT7 664 aaKnown RBP9.59□□□□□ -0.87
CHD1-204ENST00000505982 PBX4Q9BYU1 374 aa9.59□□□□□ -0.87
CHD1-204ENST00000505982 MRS2Q9HD23 443 aa9.59□□□□□ -0.87
CHD1-204ENST00000505982 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
CHD1-204ENST00000505982 HMX2A2RU54 273 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 TM4SF5O14894 197 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 SART1O43290 800 aaKnown RBP9.58□□□□□ -0.88
CHD1-204ENST00000505982 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
CHD1-204ENST00000505982 PTPRAP18433 802 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 VAMP1P23763 118 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 NCAPG2Q86XI2 1143 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 CLEC10AQ8IUN9 316 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 SEC31BQ9NQW1 1179 aa9.58□□□□□ -0.88
CHD1-204ENST00000505982 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
CHD1-204ENST00000505982 RPLP1P05386 114 aaKnown RBP9.57□□□□□ -0.88
CHD1-204ENST00000505982 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD1-204ENST00000505982 SPINK2P20155 84 aa9.57□□□□□ -0.88
CHD1-204ENST00000505982 DUSP9Q99956 384 aaKnown RBP9.57□□□□□ -0.88
CHD1-204ENST00000505982 SH2B1Q9NRF2 756 aaPredicted RBP9.57□□□□□ -0.88
CHD1-204ENST00000505982 IGHA2P01877 340 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 EPHA1P21709 976 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 ITGAEP38570 1179 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 FAM20CQ8IXL6 584 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 CEP120Q8N960 986 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 FAM83CQ9BQN1 747 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 IGSF5Q9NSI5 407 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 PARP2Q9UGN5 583 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
CHD1-204ENST00000505982 A6NHS1 94 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 PRR19A6NJB7 356 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
CHD1-204ENST00000505982 RECKO95980 971 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 WNT11O96014 354 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 NEFLP07196 543 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 CABP4P57796 275 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 ADAMTSL4Q6UY14 1074 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 DTX1Q86Y01 620 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 WNT8BQ93098 351 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 KLHDC7BQ96G42 594 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 FAM161BQ96MY7 647 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 ADAM19Q9H013 955 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 KCNF1Q9H3M0 494 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 RNF114Q9Y508 228 aa9.55□□□□□ -0.88
CHD1-204ENST00000505982 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
CHD1-204ENST00000505982 PSMD2Q13200 908 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms