RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 SUPT20HQ8NEM7 779 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
VCAN-206ENST00000505615 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
VCAN-206ENST00000505615 MAP3K15Q6ZN16 1313 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
VCAN-206ENST00000505615 RNF40O75150 1001 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 TBC1D8O95759 1140 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 SPRYD3Q8NCJ5 442 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 DPF2Q92785 391 aa9.41□□□□□ -0.9
VCAN-206ENST00000505615 LAMB1P07942 1786 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 ASTN2O75129 1339 aaPredicted RBP9.4□□□□□ -0.9
VCAN-206ENST00000505615 GPR25O00155 361 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 PSMD14O00487 310 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 GPTP24298 496 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 PADI6Q6TGC4 694 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
VCAN-206ENST00000505615 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 HOMEZQ8IX15 550 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 CDCA5Q96FF9 252 aa9.4□□□□□ -0.9
VCAN-206ENST00000505615 COL4A1P02462 1669 aa9.39□□□□□ -0.91
VCAN-206ENST00000505615 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
VCAN-206ENST00000505615 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
VCAN-206ENST00000505615 MPNDQ8N594 471 aa9.39□□□□□ -0.91
VCAN-206ENST00000505615 R3HDMLQ9H3Y0 253 aa9.39□□□□□ -0.91
VCAN-206ENST00000505615 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
VCAN-206ENST00000505615 RTL9Q8NET4 1388 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 LAMA3Q16787 3333 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 DLL1O00548 723 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 SLF2Q8IX21 1173 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 SP8Q8IXZ3 490 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 DCPSQ96C86 337 aaKnown RBP9.38□□□□□ -0.91
VCAN-206ENST00000505615 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 CFHR5Q9BXR6 569 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
VCAN-206ENST00000505615 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
VCAN-206ENST00000505615 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
VCAN-206ENST00000505615 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
VCAN-206ENST00000505615 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
VCAN-206ENST00000505615 ZNF646O15015 1829 aaPredicted RBP9.36□□□□□ -0.91
VCAN-206ENST00000505615 FKTNO75072 461 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 BBOX1O75936 387 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 RPS12P25398 132 aaKnown RBP9.36□□□□□ -0.91
VCAN-206ENST00000505615 TM4SF4P48230 202 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 COPS2P61201 443 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 FKBP1BP68106 108 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
VCAN-206ENST00000505615 MOB2Q70IA6 237 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 MCM10Q7L590 875 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 NGEFQ8N5V2 710 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
VCAN-206ENST00000505615 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 ZNF609O15014 1411 aa9.36□□□□□ -0.91
VCAN-206ENST00000505615 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
VCAN-206ENST00000505615 GRAPQ13588 217 aa9.35□□□□□ -0.91
VCAN-206ENST00000505615 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
VCAN-206ENST00000505615 KIF6Q6ZMV9 814 aa9.35□□□□□ -0.91
VCAN-206ENST00000505615 GRAPLQ8TC17 118 aaPredicted RBP9.35□□□□□ -0.91
VCAN-206ENST00000505615 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
VCAN-206ENST00000505615 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
VCAN-206ENST00000505615 UBE2Q2LH0YL09 131 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 ECE2O60344 883 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 HSPA5P11021 654 aaKnown RBP9.34□□□□□ -0.91
VCAN-206ENST00000505615 EN2P19622 333 aaPredicted RBP9.34□□□□□ -0.91
VCAN-206ENST00000505615 PRKAR2BP31323 418 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 GGCXP38435 758 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 DCTN1Q14203 1278 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 PARP10Q53GL7 1025 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
VCAN-206ENST00000505615 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 OTOP1Q7RTM1 612 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 PPP1R42Q7Z4L9 355 aa9.34□□□□□ -0.91
VCAN-206ENST00000505615 VIL1P09327 827 aaKnown RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 ZNF280AP59817 542 aaPredicted RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
VCAN-206ENST00000505615 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 ARMC5Q96C12 935 aa9.33□□□□□ -0.92
VCAN-206ENST00000505615 UTP14AQ9BVJ6 771 aaKnown RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
VCAN-206ENST00000505615 POLLQ9UGP5 575 aa9.33□□□□□ -0.92
VCAN-206ENST00000505615 RRP7AQ9Y3A4 280 aaKnown RBP9.33□□□□□ -0.92
VCAN-206ENST00000505615 TRIM17Q9Y577 477 aa9.33□□□□□ -0.92
VCAN-206ENST00000505615 PITPNM2Q9BZ72 1349 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
VCAN-206ENST00000505615 MYL6BP14649 208 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 CAP1Q01518 475 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 SCARF1Q14162 830 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 SLC17A8Q8NDX2 589 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 MIS18AQ9NYP9 233 aa9.32□□□□□ -0.92
VCAN-206ENST00000505615 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms