RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 STOML1Q9UBI4 398 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 AMOTL2Q9Y2J4 779 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 HMX2A2RU54 273 aa9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 DHX15O43143 795 aaKnown RBP9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 C19orf57Q0VDD7 668 aa9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 UVSSAQ2YD98 709 aa9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 UTP4Q969X6 686 aaKnown RBP9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 NRSN2Q9GZP1 204 aa9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
DEPDC1B-203ENST00000505017 H3BRB1 525 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 IGHA2P01877 340 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 ESRRAP11474 423 aaPredicted RBP9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 SLC51AQ86UW1 340 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 ZDHHC13Q8IUH4 622 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 FAM20CQ8IXL6 584 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 ASAP3Q8TDY4 903 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 PSMG3-AS1Q96PY0 264 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 TCF12Q99081 682 aa9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 TUT1Q9H6E5 874 aaKnown RBP9.26□□□□□ -0.93
DEPDC1B-203ENST00000505017 A0A1W2PP55 124 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 TGFB1P01137 390 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 CD97P48960 835 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 IKBKEQ14164 716 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 TMPRSS13Q9BYE2 586 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 KRTAP9-2Q9BYQ4 174 aa9.25□□□□□ -0.93
DEPDC1B-203ENST00000505017 LOC100289279A0A1B0GTE1 492 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 MEGF11A6BM72 1044 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 SSTR4P31391 388 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 GRIA4P48058 902 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 RUSC1Q9BVN2 902 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 RNF208Q9H0X6 261 aa9.24□□□□□ -0.93
DEPDC1B-203ENST00000505017 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 BMP3P12645 472 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 NFIAQ12857 509 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 ZNF423Q2M1K9 1284 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 SPRED3Q2MJR0 410 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 ANKRD34AQ69YU3 496 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 CCNJLQ8IV13 435 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 ARID3AQ99856 593 aa9.23□□□□□ -0.93
DEPDC1B-203ENST00000505017 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 TIAF1O95411 115 aa9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 ORC1Q13415 861 aa9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 RNF43Q68DV7 783 aa9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 NBPF11Q86T75 865 aa9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 FAM129BQ96TA1 746 aa9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 SOX17Q9H6I2 414 aaPredicted RBP9.22□□□□□ -0.93
DEPDC1B-203ENST00000505017 ADAMTS4O75173 837 aa9.21□□□□□ -0.94
DEPDC1B-203ENST00000505017 CTSBP07858 339 aa9.21□□□□□ -0.94
DEPDC1B-203ENST00000505017 GLYCTKQ8IVS8 523 aa9.21□□□□□ -0.94
DEPDC1B-203ENST00000505017 FAM83CQ9BQN1 747 aa9.21□□□□□ -0.94
DEPDC1B-203ENST00000505017 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
DEPDC1B-203ENST00000505017 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
DEPDC1B-203ENST00000505017 BEND4Q6ZU67 534 aa9.2□□□□□ -0.94
DEPDC1B-203ENST00000505017 CLEC10AQ8IUN9 316 aa9.2□□□□□ -0.94
DEPDC1B-203ENST00000505017 A0A096LPE4 126 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 KIAA1324LA8MWY0 1029 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 DRD2P14416 443 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 ARL4DP49703 201 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 SHISA5Q8N114 240 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 SMG8Q8ND04 991 aaKnown RBP9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 SUGCTQ9HAC7 445 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 BRPF3Q9ULD4 1205 aa9.19□□□□□ -0.94
DEPDC1B-203ENST00000505017 GPR182O15218 404 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 GSC2O15499 205 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 GSTM4Q03013 218 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 DBNDD2Q9BQY9 259 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 LIN7BQ9HAP6 207 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 PCMTD2Q9NV79 361 aa9.18□□□□□ -0.94
DEPDC1B-203ENST00000505017 ECEL1O95672 775 aa9.17□□□□□ -0.94
DEPDC1B-203ENST00000505017 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
DEPDC1B-203ENST00000505017 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
DEPDC1B-203ENST00000505017 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 SHKBP1Q8TBC3 707 aa9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 CLEC4MQ9H2X3 399 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
DEPDC1B-203ENST00000505017 MAP4P27816 1152 aaKnown RBP9.15□□□□□ -0.94
DEPDC1B-203ENST00000505017 C12orf50Q8NA57 414 aaPredicted RBP9.15□□□□□ -0.94
DEPDC1B-203ENST00000505017 C2CD4AQ8NCU7 369 aaPredicted RBP9.15□□□□□ -0.94
DEPDC1B-203ENST00000505017 NPHS2Q9NP85 383 aa9.15□□□□□ -0.94
DEPDC1B-203ENST00000505017 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
DEPDC1B-203ENST00000505017 SPINK2P20155 84 aa9.14□□□□□ -0.95
DEPDC1B-203ENST00000505017 EXOSC6Q5RKV6 272 aaKnown RBP9.14□□□□□ -0.95
DEPDC1B-203ENST00000505017 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
DEPDC1B-203ENST00000505017 NDUFB5O43674 189 aa9.13□□□□□ -0.95
DEPDC1B-203ENST00000505017 COBLO75128 1261 aa9.13□□□□□ -0.95
DEPDC1B-203ENST00000505017 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms