RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-205ENST00000504243 ZKSCAN3Q9BRR0 538 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 BCO2Q9BYV7 579 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 LACRTQ9GZZ8 138 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 ADAM19Q9H013 955 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 LATS2Q9NRM7 1088 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 GIPC1O14908 333 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 ELNP15502 786 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 CABP4P57796 275 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 FAM117BQ6P1L5 589 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 FBXO11Q86XK2 927 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 NXPE3Q969Y0 559 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 C12orf49Q9H741 205 aa7.99□□□□□ -1.13
TRAPPC13-205ENST00000504243 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
TRAPPC13-205ENST00000504243 KIAA0319Q5VV43 1072 aa7.98□□□□□ -1.13
TRAPPC13-205ENST00000504243 OSBPL7Q9BZF2 842 aa7.98□□□□□ -1.13
TRAPPC13-205ENST00000504243 BHLHE41Q9C0J9 482 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-205ENST00000504243 A0A1W2PP55 124 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 SCAMP3O14828 347 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 TRPA1O75762 1119 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 BSNDQ8WZ55 320 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 LIN7BQ9HAP6 207 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
TRAPPC13-205ENST00000504243 C9orf172C9J069 976 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 USP17L7P0C7H9 530 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 GRM2Q14416 872 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 GRIK4Q16099 956 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 PLA2G4EQ3MJ16 856 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 HHIPQ96QV1 700 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 SH2B1Q9NRF2 756 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 FAM8A1Q9UBU6 413 aa7.96□□□□□ -1.14
TRAPPC13-205ENST00000504243 H3BRJ5 948 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 LINC01387J3KSC0 135 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 IGHA1P01876 353 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 FCGRTP55899 365 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 NRG1Q02297 640 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 ASAP3Q8TDY4 903 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 WNT8BQ93098 351 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 SRCIN1Q9C0H9 1055 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 SOX13Q9UN79 622 aa7.95□□□□□ -1.14
TRAPPC13-205ENST00000504243 DEAF1O75398 565 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 EPHA1P21709 976 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 ADAMTSL4Q6UY14 1074 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 DTHD1Q6ZMT9 781 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 KLHL23Q8NBE8 558 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 RNF34Q969K3 372 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 LENG1Q96BZ8 264 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 AKAP2Q9Y2D5 859 aa7.94□□□□□ -1.14
TRAPPC13-205ENST00000504243 C1QTNF9BB2RNN3 333 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 DLL1O00548 723 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 FSCN2O14926 492 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 ERCC5P28715 1186 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 GSTT1P30711 240 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 ZNF76P36508 570 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 ARL4DP49703 201 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 TCF12Q99081 682 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 OSGEPQ9NPF4 335 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 SEC31BQ9NQW1 1179 aa7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-205ENST00000504243 A0A096LPE4 126 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 CTSHP09668 335 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 SELPP16109 830 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 CDC25BP30305 580 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 CHRNA4P43681 627 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 HDLBPQ00341 1268 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 TXNDC11Q6PKC3 985 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 IGSF5Q9NSI5 407 aa7.92□□□□□ -1.14
TRAPPC13-205ENST00000504243 IKBKEQ14164 716 aa7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 TAF1CQ15572 869 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 MEI1Q5TIA1 1274 aa7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 GPAT2Q6NUI2 795 aa7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 PRPF40BQ6NWY9 871 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 VN1R5Q7Z5H4 357 aa7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 USP21Q9UK80 565 aa7.91□□□□□ -1.14
TRAPPC13-205ENST00000504243 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 MSTNO14793 375 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 CD68P34810 354 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 GRIA4P48058 902 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 LDLRAD1Q5T700 205 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 ZFYVE1Q9HBF4 777 aa7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 METTL5Q9NRN9 209 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-205ENST00000504243 METTL12A8MUP2 240 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 ITGB2P05107 769 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 ITPKAP23677 461 aa7.89□□□□□ -1.15
TRAPPC13-205ENST00000504243 GATA4P43694 442 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms