RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 NPHS2Q9NP85 383 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 SOX13Q9UN79 622 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 F8W735 103 aaPredicted RBP4.59□□□□□ -1.67
SMAD1-203ENST00000502342 H3BRJ5 948 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 ADAM11O75078 769 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 MAPK8P45983 427 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 ARL4DP49703 201 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 ZNF157P51786 506 aaPredicted RBP4.59□□□□□ -1.67
SMAD1-203ENST00000502342 ACAD11Q709F0 780 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 MAP4K3Q8IVH8 894 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 KLHL23Q8NBE8 558 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 UBASH3BQ8TF42 649 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 MEGF10Q96KG7 1140 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 TCF12Q99081 682 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 MRPL18Q9H0U6 180 aaKnown RBP4.59□□□□□ -1.67
SMAD1-203ENST00000502342 WWC3Q9ULE0 1092 aa4.59□□□□□ -1.67
SMAD1-203ENST00000502342 K7ELQ4 463 aaPredicted RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 TM4SF5O14894 197 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 GLB1P16278 677 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 PIP4K2BP78356 416 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 GSTM4Q03013 218 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 C19orf57Q0VDD7 668 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 RSPO4Q2I0M5 234 aaPredicted RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 ZNF423Q2M1K9 1284 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 KIAA0319Q5VV43 1072 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 CCNJLQ8IV13 435 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 ZSCAN29Q8IWY8 852 aaPredicted RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 TMEM130Q8N3G9 435 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 FOXD4L4Q8WXT5 416 aaPredicted RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 SETDB2Q96T68 719 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 BHLHE41Q9C0J9 482 aaPredicted RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 DNAJC25Q9H1X3 360 aa4.58□□□□□ -1.68
SMAD1-203ENST00000502342 SRA1Q9HD15 236 aaKnown RBP4.58□□□□□ -1.68
SMAD1-203ENST00000502342 PNMA6FA0A0J9YX94 578 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 ADAM23O75077 832 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 ESRRAP11474 423 aaPredicted RBP4.57□□□□□ -1.68
SMAD1-203ENST00000502342 DSC3Q14574 896 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 NKAPLQ5M9Q1 402 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 KIAA1211Q6ZU35 1233 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 UBL7Q96S82 380 aaPredicted RBP4.57□□□□□ -1.68
SMAD1-203ENST00000502342 OSGEPQ9NPF4 335 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 NLRP2Q9NX02 1062 aa4.57□□□□□ -1.68
SMAD1-203ENST00000502342 TREHO43280 583 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 FCGRTP55899 365 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 PCDH1Q08174 1060 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMAD1-203ENST00000502342 NXPE4Q6UWF7 544 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.56□□□□□ -1.68
SMAD1-203ENST00000502342 ALKBH8Q96BT7 664 aaKnown RBP4.56□□□□□ -1.68
SMAD1-203ENST00000502342 USP26Q9BXU7 913 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 GZF1Q9H116 711 aaPredicted RBP4.56□□□□□ -1.68
SMAD1-203ENST00000502342 PPP4R2Q9NY27 417 aa4.56□□□□□ -1.68
SMAD1-203ENST00000502342 TMEM238LA0A1B0GVL6 79 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 DLGAP3O95886 979 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 GRM2Q14416 872 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 WNT8BQ93098 351 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 ASB16Q96NS5 453 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 RUSC1Q9BVN2 902 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 SSBP4Q9BWG4 385 aaPredicted RBP4.55□□□□□ -1.68
SMAD1-203ENST00000502342 BCO2Q9BYV7 579 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 CLEC4MQ9H2X3 399 aaPredicted RBP4.55□□□□□ -1.68
SMAD1-203ENST00000502342 AKAP2Q9Y2D5 859 aa4.55□□□□□ -1.68
SMAD1-203ENST00000502342 SART1O43290 800 aaKnown RBP4.54□□□□□ -1.68
SMAD1-203ENST00000502342 DYRK3O43781 588 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 ECEL1O95672 775 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 DRD2P14416 443 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 ITGB7P26010 798 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 ENOX2Q16206 610 aaKnown RBP4.54□□□□□ -1.68
SMAD1-203ENST00000502342 DTHD1Q6ZMT9 781 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 DZIP1LQ8IYY4 767 aaKnown RBP4.54□□□□□ -1.68
SMAD1-203ENST00000502342 C12orf50Q8NA57 414 aaPredicted RBP4.54□□□□□ -1.68
SMAD1-203ENST00000502342 GLIS3Q8NEA6 775 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 ZC3H12CQ9C0D7 883 aaKnown RBP4.54□□□□□ -1.68
SMAD1-203ENST00000502342 ABCB6Q9NP58 842 aa4.54□□□□□ -1.68
SMAD1-203ENST00000502342 LOC100289279A0A1B0GTE1 492 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 CTSBP07858 339 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 MAOBP27338 520 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 POU4F3Q15319 338 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 PRSS36Q5K4E3 855 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 NUTM2GQ5VZR2 741 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 ZNF576Q9H609 170 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 RNF19AQ9NV58 838 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 TRAK1Q9UPV9 953 aa4.53□□□□□ -1.68
SMAD1-203ENST00000502342 ANKRD33BA6NCL7 494 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 P4HBP07237 508 aaKnown RBP4.52□□□□□ -1.69
SMAD1-203ENST00000502342 ITPKAP23677 461 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 ATP2B2Q01814 1243 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 FAAP100Q0VG06 881 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 EXOSC6Q5RKV6 272 aaKnown RBP4.52□□□□□ -1.69
SMAD1-203ENST00000502342 PRR23CQ6ZRP0 262 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 SND1Q7KZF4 910 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMAD1-203ENST00000502342 ARMC10Q8N2F6 343 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 DDX54Q8TDD1 881 aaKnown RBP4.52□□□□□ -1.69
SMAD1-203ENST00000502342 OSBPL7Q9BZF2 842 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 RNF208Q9H0X6 261 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 KCNF1Q9H3M0 494 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 RAD18Q9NS91 495 aa4.52□□□□□ -1.69
SMAD1-203ENST00000502342 LDHBP07195 334 aaKnown RBP4.51□□□□□ -1.69
SMAD1-203ENST00000502342 H2AFB1P0C5Y9 115 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 H2AFB2P0C5Z0 115 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms