RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 SLIT2O94813 1529 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 STK36Q9NRP7 1315 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 COL16A1Q07092 1604 aaPredicted RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 GOLIM4O00461 696 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 IFIT1P09914 478 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 TCIRG1Q13488 830 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 ALX1Q15699 326 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 C11orf57Q6ZUT1 292 aaPredicted RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 CCAR1Q8IX12 1150 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 VGLL2Q8N8G2 317 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 LINC00301Q8NCQ3 95 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 ZCRB1Q8TBF4 217 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 KCNG4Q8TDN1 519 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 TEX13AQ9BXU3 409 aaPredicted RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 BCL2L12Q9HB09 334 aa8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-203ENST00000500869 COL5A3P25940 1745 aaPredicted RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 NRAPQ86VF7 1730 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 TUBB4AP04350 444 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 BICD2Q8TD16 824 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 OSBP2Q969R2 916 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 DNAJC25Q9H1X3 360 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 ATP5J2-PTCD1G3V325 749 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 PTCD1O75127 700 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CHGBP05060 677 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 ANTXR2P58335 489 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 STK3Q13188 491 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CCDC186Q7Z3E2 898 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 LRRC8AQ8IWT6 810 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CKAP2LQ8IYA6 745 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 MRPS27Q92552 414 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 MTA3Q9BTC8 594 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 DOT1LQ8TEK3 1739 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 RIOK3O14730 519 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 DHX16O60231 1041 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 HSP90B1P14625 803 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CCZ1BP86790 482 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CCZ1P86791 482 aaPredicted RBP8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 CAMK4Q16566 473 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 AK7Q96M32 723 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 BCL9LQ86UU0 1499 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 LAMB1P07942 1786 aa8.44□□□□□ -1.06
LYSMD3-203ENST00000500869 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 GSDMDP57764 484 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CHAF1AQ13111 956 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CCDC144CPQ8IYA2 1237 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 C17orf53Q8N3J3 647 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 FBXO18Q8NFZ0 1043 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 HPSEQ9Y251 543 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 RTL9Q8NET4 1388 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 IKBKBO14920 756 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 ZBTB38Q8NAP3 1195 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CACTINQ8WUQ7 758 aaKnown RBP8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 CLIP2Q9UDT6 1046 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 TUBE1Q9UJT0 475 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 RIPOR2Q9Y4F9 1068 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 ZBTB22O15209 634 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 PPP6R2O75170 966 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 RCAN1P53805 252 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 NBPF3Q9H094 633 aa8.43□□□□□ -1.06
LYSMD3-203ENST00000500869 KIF2AO00139 706 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 UBE3CQ15386 1083 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 IMMTQ16891 758 aaKnown RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 AXDND1Q5T1B0 1012 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 CEP57L1Q8IYX8 460 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 NAT10Q9H0A0 1025 aaKnown RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 FAM53CQ9NYF3 392 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 CMA1P23946 247 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 ADD2P35612 726 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 KIF23Q02241 960 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 CCDC158Q5M9N0 1113 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 SGMS1Q86VZ5 419 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 FEZ1Q99689 392 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 TRIM5Q9C035 493 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 BCL9O00512 1426 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 A0A0G2JLW4 131 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 IL2RBP14784 551 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 NCOA7Q8NI08 942 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 CEP126Q9P2H0 1117 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
LYSMD3-203ENST00000500869 AHDC1Q5TGY3 1603 aaPredicted RBP8.41□□□□□ -1.06
LYSMD3-203ENST00000500869 TCRBV5S4A2TA0A5A2 114 aa8.41□□□□□ -1.06
LYSMD3-203ENST00000500869 NLRP12P59046 1061 aa8.41□□□□□ -1.06
LYSMD3-203ENST00000500869 TTF1Q15361 905 aaPredicted RBP8.41□□□□□ -1.06
LYSMD3-203ENST00000500869 BRINP3Q76B58 766 aa8.41□□□□□ -1.06
LYSMD3-203ENST00000500869 KIAA1468Q9P260 1216 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms