RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
PMPCB-208ENST00000498530 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
PMPCB-208ENST00000498530 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
PMPCB-208ENST00000498530 SHDQ96IW2 340 aa8.69□□□□□ -1.02
PMPCB-208ENST00000498530 NECAB3Q96P71 396 aaPredicted RBP8.69□□□□□ -1.02
PMPCB-208ENST00000498530 OSMRQ99650 979 aa8.69□□□□□ -1.02
PMPCB-208ENST00000498530 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
PMPCB-208ENST00000498530 MRVI1Q9Y6F6 885 aa8.69□□□□□ -1.02
PMPCB-208ENST00000498530 PSAPP07602 524 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 TARSP26639 723 aaKnown RBP8.68□□□□□ -1.02
PMPCB-208ENST00000498530 CRKP46108 304 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 GSK3AP49840 483 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 FAM160A1Q05DH4 1040 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 RNF187Q5TA31 235 aaPredicted RBP8.68□□□□□ -1.02
PMPCB-208ENST00000498530 TRIM42Q8IWZ5 723 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 CEP120Q8N960 986 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 GOLM1Q8NBJ4 401 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 NKD1Q969G9 470 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 DZANK1Q9NVP4 752 aa8.68□□□□□ -1.02
PMPCB-208ENST00000498530 ATXN7O15265 892 aaPredicted RBP8.67□□□□□ -1.02
PMPCB-208ENST00000498530 TFE3P19532 575 aaPredicted RBP8.67□□□□□ -1.02
PMPCB-208ENST00000498530 GRIA4P48058 902 aa8.67□□□□□ -1.02
PMPCB-208ENST00000498530 SFSWAPQ12872 951 aaKnown RBP8.67□□□□□ -1.02
PMPCB-208ENST00000498530 TTBK2Q6IQ55 1244 aa8.67□□□□□ -1.02
PMPCB-208ENST00000498530 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
PMPCB-208ENST00000498530 TMEM102Q8N9M5 508 aaPredicted RBP8.67□□□□□ -1.02
PMPCB-208ENST00000498530 CPLX3Q8WVH0 158 aa8.67□□□□□ -1.02
PMPCB-208ENST00000498530 CCDC113Q9H0I3 377 aa8.67□□□□□ -1.02
PMPCB-208ENST00000498530 hCG_2014768A0A024R1R8 64 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 PLAURQ03405 335 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 SCARF1Q14162 830 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
PMPCB-208ENST00000498530 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 ANAPC16Q96DE5 110 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 PRKAB1Q9Y478 270 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 PCDHGC4Q9Y5F7 938 aa8.66□□□□□ -1.02
PMPCB-208ENST00000498530 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.66□□□□□ -1.02
PMPCB-208ENST00000498530 NFKBIEO00221 500 aa8.65□□□□□ -1.02
PMPCB-208ENST00000498530 ACPPP15309 386 aa8.65□□□□□ -1.02
PMPCB-208ENST00000498530 IBSPP21815 317 aaPredicted RBP8.65□□□□□ -1.02
PMPCB-208ENST00000498530 IGBP1P78318 339 aa8.65□□□□□ -1.02
PMPCB-208ENST00000498530 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
PMPCB-208ENST00000498530 OR6P1Q8NGX9 317 aa8.65□□□□□ -1.02
PMPCB-208ENST00000498530 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
PMPCB-208ENST00000498530 R3HCC1Q9Y3T6 440 aaKnown RBP8.65□□□□□ -1.02
PMPCB-208ENST00000498530 FAM221BA6H8Z2 402 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 THBS1P07996 1170 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 NFKB1P19838 968 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 GIPRP48546 466 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 NRLP54845 237 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 MPP2Q14168 576 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 GATAD2BQ8WXI9 593 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 PNMA5Q96PV4 448 aa8.64□□□□□ -1.03
PMPCB-208ENST00000498530 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 A0A096LPE4 126 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
PMPCB-208ENST00000498530 RAB11FIP3O75154 756 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 TNP2Q05952 138 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
PMPCB-208ENST00000498530 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
PMPCB-208ENST00000498530 FAM221AA4D161 298 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 PAGE1O75459 146 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 EIF6P56537 245 aaKnown RBP8.62□□□□□ -1.03
PMPCB-208ENST00000498530 SPEM2Q0P670 501 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 DDR2Q16832 855 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 SPRED3Q2MJR0 410 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 TRPM4Q8TD43 1214 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 METTL14Q9HCE5 456 aaKnown RBP8.62□□□□□ -1.03
PMPCB-208ENST00000498530 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 PPT2Q9UMR5 302 aa8.62□□□□□ -1.03
PMPCB-208ENST00000498530 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 CDC45O75419 566 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 F13A1P00488 732 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 IMPDH2P12268 514 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 GPLD1P80108 840 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 RASGRF1Q13972 1273 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 CWF19L2Q2TBE0 894 aaKnown RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 SEZ6Q53EL9 994 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 CCDC81Q6ZN84 652 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 DHX32Q7L7V1 743 aaKnown RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 FAM169BQ8N8A8 192 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 RBBP8NLQ8NC74 664 aaPredicted RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
PMPCB-208ENST00000498530 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 DNMT3LQ9UJW3 386 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms