RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 PCDH11XQ9BZA7 1347 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 PCDH11YQ9BZA8 1340 aa12.8□□□□□ -0.36
LRRC55-201ENST00000497933 PLCG2P16885 1265 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 KRT83P78385 493 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 IKBKGQ9Y6K9 419 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
LRRC55-201ENST00000497933 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
LRRC55-201ENST00000497933 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 KCNA6P17658 529 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 HOXC9P31274 260 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 RTN1Q16799 776 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 UTP14CQ5TAP6 766 aaKnown RBP12.79□□□□□ -0.36
LRRC55-201ENST00000497933 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 KIF4AO95239 1232 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
LRRC55-201ENST00000497933 RTCBQ9Y3I0 505 aaKnown RBP12.79□□□□□ -0.36
LRRC55-201ENST00000497933 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 CALM1P0DP23 149 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 CALM2P0DP24 149 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 CALM3P0DP25 149 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 C17orf53Q8N3J3 647 aaPredicted RBP12.78□□□□□ -0.36
LRRC55-201ENST00000497933 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRRC55-201ENST00000497933 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 NPC1L1Q9UHC9 1359 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 HOXB7P09629 217 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
LRRC55-201ENST00000497933 FERP16591 822 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 ACTN2P35609 894 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
LRRC55-201ENST00000497933 KRT86O43790 486 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 EVCP57679 992 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 ELF2Q15723 593 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.36
LRRC55-201ENST00000497933 ALG1Q9BT22 464 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 RAD50Q92878 1312 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 PHACTR2O75167 634 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 TSNARE1Q96NA8 513 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 C8orf37Q96NL8 207 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.36
LRRC55-201ENST00000497933 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
LRRC55-201ENST00000497933 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
LRRC55-201ENST00000497933 IRS4O14654 1257 aaPredicted RBP12.77□□□□□ -0.37
LRRC55-201ENST00000497933 PRC1O43663 620 aa12.77□□□□□ -0.37
LRRC55-201ENST00000497933 PPP1R14CQ8TAE6 165 aa12.77□□□□□ -0.37
LRRC55-201ENST00000497933 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
LRRC55-201ENST00000497933 FAM76AQ8TAV0 307 aa12.76□□□□□ -0.37
LRRC55-201ENST00000497933 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
LRRC55-201ENST00000497933 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
LRRC55-201ENST00000497933 TBC1D5Q92609 795 aa12.76□□□□□ -0.37
LRRC55-201ENST00000497933 SPAG5Q96R06 1193 aa12.76□□□□□ -0.37
LRRC55-201ENST00000497933 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
LRRC55-201ENST00000497933 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
LRRC55-201ENST00000497933 USP26Q9BXU7 913 aa12.76□□□□□ -0.37
LRRC55-201ENST00000497933 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
LRRC55-201ENST00000497933 CALML3P27482 149 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 PSMA7O14818 248 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 ZBTB40Q9NUA8 1239 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 RLBP1P12271 317 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 PPP2R3AQ06190 1150 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 IQCGQ9H095 443 aaKnown RBP12.75□□□□□ -0.37
LRRC55-201ENST00000497933 USP37Q86T82 979 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
LRRC55-201ENST00000497933 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 EYA3Q99504 573 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 SAMM50Q9Y512 469 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
LRRC55-201ENST00000497933 SBNO1A3KN83 1393 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 AFAP1L1Q8TED9 768 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
LRRC55-201ENST00000497933 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
LRRC55-201ENST00000497933 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms