RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 GRIN3BO60391 1043 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 GREM1O60565 184 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 APBA3O96018 575 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 ATF3P18847 181 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 FSHRP23945 695 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 DNM1Q05193 864 aaKnown RBP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 DGKZQ13574 1117 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 RASA3Q14644 834 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 TLR1Q15399 786 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 SH3PXD2AQ5TCZ1 1133 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 KIAA0319Q5VV43 1072 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 FAM9AQ8IZU1 332 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 SLC17A8Q8NDX2 589 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 GLIS3Q8NEA6 775 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 RHOVQ96L33 236 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 RNPC3Q96LT9 517 aaKnown RBP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 NT5C1AQ9BXI3 368 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 KLF16Q9BXK1 252 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 C19orf44Q9H6X5 657 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 CWC22Q9HCG8 908 aaKnown RBP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 PGPEP1Q9NXJ5 209 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 GGT7Q9UJ14 662 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 PCDHGB7Q9Y5F8 929 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 NCOA3Q9Y6Q9 1424 aa3.5□□□□□ -1.85
CKS1BP2-201ENST00000497342 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 PZPP20742 1482 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 SZT2Q5T011 3432 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 SPATA31C2B4DYI2 1134 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 K7ELQ4 463 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 FOXN1O15353 648 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 RAB11FIP3O75154 756 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 MICAL2O94851 1124 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 NR3C2P08235 984 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 RLBP1P12271 317 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 GARTP22102 1010 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 INPP5BP32019 993 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 CENPCQ03188 943 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 AAMPQ13685 434 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 RAB33AQ14088 237 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 WDR44Q5JSH3 913 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 PLA2G2CQ5R387 149 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 FAM182BQ5T319 152 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 KIAA0907Q7Z7F0 614 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 CKAP2LQ8IYA6 745 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 RHBDD1Q8TEB9 315 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 DDX17Q92841 729 aaKnown RBP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 LRRC3Q9BY71 257 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 NIFKQ9BYG3 293 aaKnown RBP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 PHACTR1Q9C0D0 580 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 GRIP2Q9C0E4 1043 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC113Q9H0I3 377 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 CHRDQ9H2X0 955 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 SUV39H2Q9H5I1 410 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 ARHGEF10LQ9HCE6 1279 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 KCNMB2Q9Y691 235 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 COL6A3P12111 3177 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 TNS1Q9HBL0 1735 aaKnown RBP3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 ASXL1Q8IXJ9 1541 aa3.49□□□□□ -1.85
CKS1BP2-201ENST00000497342 CASZ1Q86V15 1759 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 NUP188Q5SRE5 1749 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 KIF27Q86VH2 1401 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 RNF223E7ERA6 249 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 WNT7AO00755 349 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 TRIM37O94972 964 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 VIL1P09327 827 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 USP17L7P0C7H9 530 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 HOXD8P13378 290 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 YBX3P16989 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 GSTT1P30711 240 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 PTGIRP43119 386 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 NFX1Q12986 1120 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 CTC1Q2NKJ3 1217 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 ARSHQ5FYA8 562 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 HABP4Q5JVS0 413 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 TBCELQ5QJ74 424 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 MEI1Q5TIA1 1274 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 NBPF10Q6P3W6 841 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 RPUSD2Q8IZ73 545 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 MICAL1Q8TDZ2 1067 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 PMEPA1Q969W9 287 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 MARVELD3Q96A59 401 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 GCC1Q96CN9 775 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 MRFAP1L1Q96HT8 127 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 STAC3Q96MF2 364 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 SLC26A8Q96RN1 970 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZNF408Q9H9D4 720 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 KLK14Q9P0G3 267 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 ADAMTS1Q9UHI8 967 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 MRPL42Q9Y6G3 142 aaKnown RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 V9GY48 417 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 RREB1Q92766 1687 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 ROBO2Q9HCK4 1378 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 KIDINS220Q9ULH0 1771 aa3.48□□□□□ -1.85
CKS1BP2-201ENST00000497342 PIEZO1Q92508 2521 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 FMN1Q68DA7 1419 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms