RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
HOXA9-206ENST00000497089 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
HOXA9-206ENST00000497089 KCPQ6ZWJ8 1503 aa8.53□□□□□ -1.04
HOXA9-206ENST00000497089 C4AP0C0L4 1744 aa8.53□□□□□ -1.04
HOXA9-206ENST00000497089 ESPNB1AK53 854 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
HOXA9-206ENST00000497089 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
HOXA9-206ENST00000497089 FSHRP23945 695 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 YY1P25490 414 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 NR5A1Q13285 461 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 EML3Q32P44 896 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 DEPDC4Q8N2C3 294 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 NLGN2Q8NFZ4 835 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 NUDCQ9Y266 331 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
HOXA9-206ENST00000497089 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
HOXA9-206ENST00000497089 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
HOXA9-206ENST00000497089 CRKLP46109 303 aaKnown RBP8.51□□□□□ -1.05
HOXA9-206ENST00000497089 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
HOXA9-206ENST00000497089 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
HOXA9-206ENST00000497089 IRX2Q9BZI1 471 aaPredicted RBP8.51□□□□□ -1.05
HOXA9-206ENST00000497089 KIF13BQ9NQT8 1826 aa8.51□□□□□ -1.05
HOXA9-206ENST00000497089 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
HOXA9-206ENST00000497089 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 PRKAR2BP31323 418 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 NCOA4Q13772 614 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
HOXA9-206ENST00000497089 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
HOXA9-206ENST00000497089 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
HOXA9-206ENST00000497089 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 PHACTR3Q96KR7 559 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 IPO9Q96P70 1041 aaKnown RBP8.5□□□□□ -1.05
HOXA9-206ENST00000497089 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
HOXA9-206ENST00000497089 NR3C2P08235 984 aa8.49□□□□□ -1.05
HOXA9-206ENST00000497089 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
HOXA9-206ENST00000497089 GYS1P13807 737 aa8.49□□□□□ -1.05
HOXA9-206ENST00000497089 NNTQ13423 1086 aa8.49□□□□□ -1.05
HOXA9-206ENST00000497089 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
HOXA9-206ENST00000497089 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
HOXA9-206ENST00000497089 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
HOXA9-206ENST00000497089 USP42Q9H9J4 1324 aaKnown RBP8.49□□□□□ -1.05
HOXA9-206ENST00000497089 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 HTATSF1O43719 755 aaKnown RBP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 GRIN3BO60391 1043 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 MMP10P09238 476 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 U2AF1L5P0DN76 240 aaPredicted RBP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 RFC4P35249 363 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 U2AF1Q01081 240 aaKnown RBP eCLIP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 GPR162Q16538 588 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 CCDC116Q8IYX3 515 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 C10orf71Q711Q0 1435 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 DGAT1O75907 488 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 YBX3P16989 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 RASA1P20936 1047 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 DHX9Q08211 1270 aaKnown RBP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 TEFQ10587 303 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 ELOAQ14241 798 aaKnown RBP8.48□□□□□ -1.05
HOXA9-206ENST00000497089 ZNF790Q6PG37 636 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 HPS1Q92902 700 aa8.48□□□□□ -1.05
HOXA9-206ENST00000497089 UTRNP46939 3433 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 HEG1Q9ULI3 1381 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 FAM196BA6NMK8 535 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 ANP32CO43423 234 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 RAB15P59190 212 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 TGFB2P61812 414 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 RALBP1Q15311 655 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 TTC5Q8N0Z6 440 aa8.47□□□□□ -1.05
HOXA9-206ENST00000497089 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
HOXA9-206ENST00000497089 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
HOXA9-206ENST00000497089 TEX13AQ9BXU3 409 aaPredicted RBP8.47□□□□□ -1.05
HOXA9-206ENST00000497089 PXDNLA1KZ92 1463 aa8.46□□□□□ -1.05
HOXA9-206ENST00000497089 BRCA1P38398 1863 aaKnown RBP8.46□□□□□ -1.05
HOXA9-206ENST00000497089 ERVH48-1M5A8F1 160 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 STARD3NLO95772 234 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 AVPP01185 164 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 TM4SF1P30408 202 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 ATP1A2P50993 1020 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
HOXA9-206ENST00000497089 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 PPP1R26Q5T8A7 1209 aaPredicted RBP8.46□□□□□ -1.06
HOXA9-206ENST00000497089 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 ZNF784Q8NCA9 323 aaPredicted RBP8.46□□□□□ -1.06
HOXA9-206ENST00000497089 FMNL2Q96PY5 1086 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
HOXA9-206ENST00000497089 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.06
HOXA9-206ENST00000497089 SRP68Q9UHB9 627 aaKnown RBP8.46□□□□□ -1.06
HOXA9-206ENST00000497089 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms