RNA–Protein interactions for RNA: ENST00000496983.1

DHFR2-205, Transcript of dihydrofolate reductase 2, humanhuman

TSL 4

Gene DHFR2, Length 591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-205ENST00000496983 CCDC93Q567U6 631 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 INTS3Q68E01 1043 aaKnown RBP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 DDX21Q9NR30 783 aaKnown RBP eCLIP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 ZNF277Q9NRM2 450 aaPredicted RBP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 DICER1Q9UPY3 1922 aaKnown RBP10.28□□□□□ -0.76
DHFR2-205ENST00000496983 ANKRD36CQ5JPF3 1778 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 CACNA1FO60840 1977 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 PTPRCP08575 1304 aa10.28□□□□□ -0.76
DHFR2-205ENST00000496983 GLTPD2A6NH11 291 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 TOMM70O94826 608 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 HOXB7P09629 217 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 HTRA3P83110 453 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 RTL5Q5HYW3 569 aaPredicted RBP10.27□□□□□ -0.77
DHFR2-205ENST00000496983 C7orf43Q8WVR3 580 aa10.27□□□□□ -0.77
DHFR2-205ENST00000496983 UTP14AQ9BVJ6 771 aaKnown RBP10.27□□□□□ -0.77
DHFR2-205ENST00000496983 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 DDNO94850 711 aaPredicted RBP10.26□□□□□ -0.77
DHFR2-205ENST00000496983 ALDH1B1P30837 517 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
DHFR2-205ENST00000496983 PARP10Q53GL7 1025 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 NLRP10Q86W26 655 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 PHAXQ9H814 394 aaKnown RBP10.26□□□□□ -0.77
DHFR2-205ENST00000496983 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
DHFR2-205ENST00000496983 LAMB2P55268 1798 aa10.26□□□□□ -0.77
DHFR2-205ENST00000496983 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
DHFR2-205ENST00000496983 TAF1P21675 1872 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 PPEF1O14829 653 aaPredicted RBP10.25□□□□□ -0.77
DHFR2-205ENST00000496983 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
DHFR2-205ENST00000496983 TCIRG1Q13488 830 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 CRY2Q49AN0 593 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 SOGA3Q5TF21 947 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 GPIHBP1Q8IV16 184 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
DHFR2-205ENST00000496983 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 TMUB1Q9BVT8 246 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 DBF4Q9UBU7 674 aaPredicted RBP10.25□□□□□ -0.77
DHFR2-205ENST00000496983 LTBP3Q9NS15 1303 aa10.25□□□□□ -0.77
DHFR2-205ENST00000496983 POTECB2RU33 542 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 FLIIQ13045 1269 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 SIRT2Q8IXJ6 389 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 PLBD2Q8NHP8 589 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
DHFR2-205ENST00000496983 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
DHFR2-205ENST00000496983 ZNF541Q9H0D2 1346 aa10.24□□□□□ -0.77
DHFR2-205ENST00000496983 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
DHFR2-205ENST00000496983 F6X3S4 739 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 VEGFAP15692 232 aaPredicted RBP10.23□□□□□ -0.77
DHFR2-205ENST00000496983 IARSP41252 1262 aaKnown RBP10.23□□□□□ -0.77
DHFR2-205ENST00000496983 TRIM67Q6ZTA4 783 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 SMC5Q8IY18 1101 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 FAM89AQ96GI7 184 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 MYD88Q99836 296 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
DHFR2-205ENST00000496983 HYPKQ9NX55 129 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 RBM19Q9Y4C8 960 aaKnown RBP10.23□□□□□ -0.77
DHFR2-205ENST00000496983 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
DHFR2-205ENST00000496983 COL4A5P29400 1685 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 DDX60Q8IY21 1712 aaKnown RBP10.22□□□□□ -0.77
DHFR2-205ENST00000496983 WDR90Q96KV7 1748 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 HOXA10P31260 410 aaPredicted RBP10.22□□□□□ -0.77
DHFR2-205ENST00000496983 RTKN2Q8IZC4 609 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 CRAMP1Q96RY5 1269 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 ISCA1Q9BUE6 129 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 STK31Q9BXU1 1019 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 SH3TC1Q8TE82 1336 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 SNED1Q8TER0 1413 aa10.22□□□□□ -0.77
DHFR2-205ENST00000496983 S1PR4O95977 384 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 PUS10Q3MIT2 529 aaKnown RBP10.21□□□□□ -0.77
DHFR2-205ENST00000496983 SLC10A5Q5PT55 438 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 SCUBE3Q8IX30 993 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 SMC1BQ8NDV3 1235 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 CCDC85AQ96PX6 553 aaPredicted RBP10.21□□□□□ -0.77
DHFR2-205ENST00000496983 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 GJA3Q9Y6H8 435 aa10.21□□□□□ -0.77
DHFR2-205ENST00000496983 COL4A1P02462 1669 aa10.21□□□□□ -0.78
DHFR2-205ENST00000496983 CCT4P50991 539 aaKnown RBP10.2□□□□□ -0.78
DHFR2-205ENST00000496983 AOC3Q16853 763 aa10.2□□□□□ -0.78
DHFR2-205ENST00000496983 EAPPQ56P03 285 aaPredicted RBP10.2□□□□□ -0.78
DHFR2-205ENST00000496983 DDX46Q7L014 1031 aaKnown RBP10.2□□□□□ -0.78
DHFR2-205ENST00000496983 LARGE2Q8N3Y3 721 aa10.2□□□□□ -0.78
DHFR2-205ENST00000496983 THAP11Q96EK4 314 aa10.2□□□□□ -0.78
DHFR2-205ENST00000496983 MEIS3Q99687 375 aa10.2□□□□□ -0.78
DHFR2-205ENST00000496983 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
DHFR2-205ENST00000496983 IRS4O14654 1257 aaPredicted RBP10.19□□□□□ -0.78
DHFR2-205ENST00000496983 PPIP5K2O43314 1243 aa10.19□□□□□ -0.78
DHFR2-205ENST00000496983 GFRA3O60609 400 aa10.19□□□□□ -0.78
DHFR2-205ENST00000496983 ADH1BP00325 375 aa10.19□□□□□ -0.78
DHFR2-205ENST00000496983 FSTL1Q12841 308 aa10.19□□□□□ -0.78
DHFR2-205ENST00000496983 GRAPQ13588 217 aa10.19□□□□□ -0.78
DHFR2-205ENST00000496983 PLA2G2CQ5R387 149 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms