RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PPFIA2O75334 1257 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 PDE1AP54750 535 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 IFT88Q13099 833 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 BLOC1S2Q6QNY1 142 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 HOOK2Q96ED9 719 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 NAPGQ99747 312 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 G3BP2Q9UN86 482 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 CD109Q6YHK3 1445 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 BIN1O00499 593 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 TWISTNBQ3B726 338 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 SPECC1LQ69YQ0 1117 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 PNMA8AQ86V59 439 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 IGSF22Q8N9C0 903 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 CCHCR1Q8TD31 782 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 DHX58Q96C10 678 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 RMI1Q9H9A7 625 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 MTMR6Q9Y217 621 aa9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 ZNF644Q9H582 1327 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-205ENST00000496549 FANCCQ00597 558 aa9.27□□□□□ -0.92
CRNKL1-205ENST00000496549 SH2D4BQ5SQS7 431 aa9.27□□□□□ -0.92
CRNKL1-205ENST00000496549 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.92
CRNKL1-205ENST00000496549 ATP6V0A4Q9HBG4 840 aa9.27□□□□□ -0.92
CRNKL1-205ENST00000496549 NR1I2O75469 434 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 MAP4K4O95819 1239 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 DESP17661 470 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 PCK1P35558 622 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 RPS6KA3P51812 740 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 STK3Q13188 491 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 POLD1P28340 1107 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 CCNHP51946 323 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 SH3BGRP55822 239 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 DYNC1I2Q13409 638 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 DRP2Q13474 957 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 CUL3Q13618 768 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 GNPTABQ3T906 1256 aa9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 TCOF1Q13428 1488 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-205ENST00000496549 MRPL12P52815 198 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 ACBD5Q5T8D3 534 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 ACRBPQ8NEB7 543 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 B4GALNT2Q8NHY0 566 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 VIPAS39Q9H9C1 493 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 NUP153P49790 1475 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 WDR7Q9Y4E6 1490 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 PLXNC1O60486 1568 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 SKAP2O75563 359 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 SMTNP53814 917 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 PLCB4Q15147 1175 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 CCDC93Q567U6 631 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 ZCCHC11Q5TAX3 1644 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 PPP1R7Q15435 360 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 CPLX4Q7Z7G2 160 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 CEP104O60308 925 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 RAB11FIP3O75154 756 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 FAM160A1Q05DH4 1040 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 MYO1EQ12965 1108 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 C11orf91Q3C1V1 193 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 SSH2Q76I76 1423 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 TPCN1Q9ULQ1 816 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 PARP3Q9Y6F1 533 aa9.26□□□□□ -0.93
CRNKL1-205ENST00000496549 E7EVH7 732 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 PFDN1O60925 122 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 N4BP1O75113 896 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 MAP3K9P80192 1104 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 CEP128Q6ZU80 1094 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 C11orf57Q6ZUT1 292 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 SDCCAG8Q86SQ7 713 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 TAX1BP1Q86VP1 789 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 FBF1Q8TES7 1133 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 KCND1Q9NSA2 647 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 MBD5Q9P267 1494 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 SOS1Q07889 1333 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 EIF3HO15372 352 aaKnown RBP eCLIP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 DIAPH1O60610 1272 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 TPP2P29144 1249 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 PDE6BP35913 854 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 FAM173BQ6P4H8 233 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 ZNF365Q70YC5 407 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 ARMC9Q7Z3E5 817 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 CCDC170Q8IYT3 715 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 GBP7Q8N8V2 638 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 NECAB1Q8N987 351 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 PARD3BQ8TEW8 1205 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 RPGRIP1Q96KN7 1286 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 RGL1Q9NZL6 768 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 DIP2BQ9P265 1576 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 MAP2K7O14733 419 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 IRAK1P51617 712 aa9.25□□□□□ -0.93
CRNKL1-205ENST00000496549 BEND6Q5SZJ8 279 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms