RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	TDRD7	Q8NHU6	1098 aa	Known RBP	12.15	□□□□□ -0.46
CALD1-223	ENST00000496024	CRBN	Q96SW2	442 aa		12.15	□□□□□ -0.46
CALD1-223	ENST00000496024	GML	Q99445	158 aa		12.15	□□□□□ -0.46
CALD1-223	ENST00000496024	EXOC6B	Q9Y2D4	811 aa		12.15	□□□□□ -0.46
CALD1-223	ENST00000496024	POLR2A	P24928	1970 aa	Known RBP	12.15	□□□□□ -0.46
CALD1-223	ENST00000496024	ZNF646	O15015	1829 aa	Predicted RBP	12.14	□□□□□ -0.47
CALD1-223	ENST00000496024		A0A1B0GUL7	405 aa		12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	SIRT2	Q8IXJ6	389 aa		12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	CERS5	Q8N5B7	392 aa		12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	AKAP2	Q9Y2D5	859 aa		12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.14	□□□□□ -0.47
CALD1-223	ENST00000496024	MYO3B	Q8WXR4	1341 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	MYH13	Q9UKX3	1938 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	HMMR	O75330	724 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	PHKA1	P46020	1223 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	KIF4B	Q2VIQ3	1234 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	MFSD14B	Q5SR56	506 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	GORAB	Q5T7V8	394 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	CNTROB	Q8N137	903 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	OGFOD1	Q8N543	542 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	XAGE2	Q96GT9	111 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	MYOZ2	Q9NPC6	264 aa		12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	NOP58	Q9Y2X3	529 aa	Known RBP	12.13	□□□□□ -0.47
CALD1-223	ENST00000496024	FAM205A	Q6ZU69	1335 aa		12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	HSPA6	P17066	643 aa		12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	ZNF280A	P59817	542 aa	Predicted RBP	12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	GNL3L	Q9NVN8	582 aa	Known RBP	12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	HDAC9	Q9UKV0	1011 aa		12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	ADAMTSL1	Q8N6G6	1762 aa		12.12	□□□□□ -0.47
CALD1-223	ENST00000496024	ASTN2	O75129	1339 aa	Predicted RBP	12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	TRAF5	O00463	557 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	HTRA3	P83110	453 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	FMR1	Q06787	632 aa	Known RBP eCLIP	12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	SCARF1	Q14162	830 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	GRIK5	Q16478	980 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	TNNI3K	Q59H18	835 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	CCDC102B	Q68D86	513 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	FPGT-TNNI3K	V9GXZ4	949 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	ZNF609	O15014	1411 aa		12.11	□□□□□ -0.47
CALD1-223	ENST00000496024	ITGBL1	O95965	494 aa	Predicted RBP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	RBM5	P52756	815 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	FKBP1A	P62942	108 aa	Known RBP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	NBPF9	Q3BBW0	867 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	ERC1	Q8IUD2	1116 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	IL1RAPL2	Q9NP60	686 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	GGA3	Q9NZ52	723 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	TTF2	Q9UNY4	1162 aa	Known RBP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	SCAF8	Q9UPN6	1271 aa	Known RBP	12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	PCDHAC2	Q9Y5I4	1007 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	ARAP2	Q8WZ64	1704 aa		12.1	□□□□□ -0.47
CALD1-223	ENST00000496024	IRX6	P78412	446 aa	Predicted RBP	12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	DLGAP5	Q15398	846 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	CFAP100	Q494V2	611 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	HSP90AB4P	Q58FF6	505 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	ANGEL2	Q5VTE6	544 aa	Known RBP	12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	DLK2	Q6UY11	383 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	USP48	Q86UV5	1035 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	RHPN1	Q8TCX5	695 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	ZC3H15	Q8WU90	426 aa	Known RBP	12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	TBC1D22A	Q8WUA7	517 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	DCPS	Q96C86	337 aa	Known RBP	12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	DBNDD2	Q9BQY9	259 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	GPR108	Q9NPR9	543 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	DENND2A	Q9ULE3	1009 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	PCDHB15	Q9Y5E8	787 aa		12.09	□□□□□ -0.47
CALD1-223	ENST00000496024	COL1A1	P02452	1464 aa	Predicted RBP	12.08	□□□□□ -0.47
CALD1-223	ENST00000496024	ADM5	C9JUS6	153 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	WNT10B	O00744	389 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	APLP1	P51693	650 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	RASGRF1	Q13972	1273 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	TTC39A	Q5SRH9	613 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	KRT26	Q7Z3Y9	468 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	AACS	Q86V21	672 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	WDR66	Q8TBY9	1149 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	EAF2	Q96CJ1	260 aa	Predicted RBP	12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	ZNF408	Q9H9D4	720 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	TLR7	Q9NYK1	1049 aa	Known RBP	12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	PGAP2	Q9UHJ9	254 aa		12.08	□□□□□ -0.48
CALD1-223	ENST00000496024	PI16	Q6UXB8	463 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	CDC37L1	Q7L3B6	337 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	SULF1	Q8IWU6	871 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	EXOC6	Q8TAG9	804 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	KIF1BP	Q96EK5	621 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	SNRK	Q9NRH2	765 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	ABCF2	Q9UG63	623 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	PASK	Q96RG2	1323 aa		12.07	□□□□□ -0.48
CALD1-223	ENST00000496024	CEP350	Q5VT06	3117 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	CLRN2	A0PK11	232 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	SEMA3E	O15041	775 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	SMARCA5	O60264	1052 aa	Predicted RBP	12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	RAB11FIP3	O75154	756 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	LDHB	P07195	334 aa	Known RBP	12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	PRDX5	P30044	214 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	CRK	P46108	304 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	CCDC158	Q5M9N0	1113 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	CLASRP	Q8N2M8	674 aa	Known RBP	12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	SPATA5	Q8NB90	893 aa		12.06	□□□□□ -0.48

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