RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 NLRP12P59046 1061 aa8.52□□□□□ -1.05
CCDC66-222ENST00000494672 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
CCDC66-222ENST00000494672 RNF208Q9H0X6 261 aa8.52□□□□□ -1.05
CCDC66-222ENST00000494672 TUT1Q9H6E5 874 aaKnown RBP8.52□□□□□ -1.05
CCDC66-222ENST00000494672 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
CCDC66-222ENST00000494672 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
CCDC66-222ENST00000494672 SERPINB4P48594 390 aa8.51□□□□□ -1.05
CCDC66-222ENST00000494672 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
CCDC66-222ENST00000494672 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
CCDC66-222ENST00000494672 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
CCDC66-222ENST00000494672 RUSC1Q9BVN2 902 aa8.51□□□□□ -1.05
CCDC66-222ENST00000494672 BHLHE41Q9C0J9 482 aaPredicted RBP8.51□□□□□ -1.05
CCDC66-222ENST00000494672 NDUFB5O43674 189 aa8.5□□□□□ -1.05
CCDC66-222ENST00000494672 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
CCDC66-222ENST00000494672 PEAR1Q5VY43 1037 aaPredicted RBP8.5□□□□□ -1.05
CCDC66-222ENST00000494672 VN1R5Q7Z5H4 357 aa8.5□□□□□ -1.05
CCDC66-222ENST00000494672 LATS2Q9NRM7 1088 aa8.5□□□□□ -1.05
CCDC66-222ENST00000494672 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 POLR3DP05423 398 aaPredicted RBP8.49□□□□□ -1.05
CCDC66-222ENST00000494672 ECM1Q16610 540 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 HGSNATQ68CP4 663 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 FDX2Q6P4F2 183 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 GALNT12Q8IXK2 581 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 CITED4Q96RK1 184 aa8.49□□□□□ -1.05
CCDC66-222ENST00000494672 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
CCDC66-222ENST00000494672 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
CCDC66-222ENST00000494672 ESRRAP11474 423 aaPredicted RBP8.47□□□□□ -1.05
CCDC66-222ENST00000494672 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
CCDC66-222ENST00000494672 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
CCDC66-222ENST00000494672 TXNDC2Q86VQ3 553 aa8.47□□□□□ -1.05
CCDC66-222ENST00000494672 CLEC10AQ8IUN9 316 aa8.47□□□□□ -1.05
CCDC66-222ENST00000494672 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
CCDC66-222ENST00000494672 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
CCDC66-222ENST00000494672 A0A1W2PP55 124 aa8.46□□□□□ -1.06
CCDC66-222ENST00000494672 BMP3P12645 472 aa8.46□□□□□ -1.06
CCDC66-222ENST00000494672 PREPP48147 710 aa8.46□□□□□ -1.06
CCDC66-222ENST00000494672 FAM20CQ8IXL6 584 aa8.46□□□□□ -1.06
CCDC66-222ENST00000494672 LIN7BQ9HAP6 207 aa8.46□□□□□ -1.06
CCDC66-222ENST00000494672 A0A096LPE4 126 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 A0A1W2PPZ6 126 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
CCDC66-222ENST00000494672 CPNE3O75131 537 aaKnown RBP8.45□□□□□ -1.06
CCDC66-222ENST00000494672 GSTM4Q03013 218 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 CCNJLQ8IV13 435 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 TRIM42Q8IWZ5 723 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 KCNF1Q9H3M0 494 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 CYP4F12Q9HCS2 524 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 PCMTD2Q9NV79 361 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 HIF3AQ9Y2N7 669 aa8.45□□□□□ -1.06
CCDC66-222ENST00000494672 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 NFIAQ12857 509 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 EXOSC6Q5RKV6 272 aaKnown RBP8.44□□□□□ -1.06
CCDC66-222ENST00000494672 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
CCDC66-222ENST00000494672 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 C12orf50Q8NA57 414 aaPredicted RBP8.44□□□□□ -1.06
CCDC66-222ENST00000494672 TMC1Q8TDI8 760 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
CCDC66-222ENST00000494672 CLEC4MQ9H2X3 399 aaPredicted RBP8.44□□□□□ -1.06
CCDC66-222ENST00000494672 LOC100289279A0A1B0GTE1 492 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 HMX2A2RU54 273 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 SMG8Q8ND04 991 aaKnown RBP8.43□□□□□ -1.06
CCDC66-222ENST00000494672 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 TCF12Q99081 682 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
CCDC66-222ENST00000494672 SSTR4P31391 388 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 GRIA4P48058 902 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 SUGCTQ9HAC7 445 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 ZFYVE1Q9HBF4 777 aa8.42□□□□□ -1.06
CCDC66-222ENST00000494672 COBLO75128 1261 aa8.41□□□□□ -1.06
CCDC66-222ENST00000494672 ORC1Q13415 861 aa8.41□□□□□ -1.06
CCDC66-222ENST00000494672 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
CCDC66-222ENST00000494672 NIF3L1Q9GZT8 377 aa8.41□□□□□ -1.06
CCDC66-222ENST00000494672 DNAJC25Q9H1X3 360 aa8.41□□□□□ -1.06
CCDC66-222ENST00000494672 EHD4Q9H223 541 aa8.41□□□□□ -1.06
CCDC66-222ENST00000494672 CYP11A1P05108 521 aa8.4□□□□□ -1.06
CCDC66-222ENST00000494672 RXRBP28702 533 aa8.4□□□□□ -1.06
CCDC66-222ENST00000494672 ZNF423Q2M1K9 1284 aa8.4□□□□□ -1.06
CCDC66-222ENST00000494672 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
CCDC66-222ENST00000494672 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
CCDC66-222ENST00000494672 GRIK1P39086 918 aa8.39□□□□□ -1.07
CCDC66-222ENST00000494672 USP11P51784 963 aa8.39□□□□□ -1.07
CCDC66-222ENST00000494672 HP1BP3Q5SSJ5 553 aaPredicted RBP8.39□□□□□ -1.07
CCDC66-222ENST00000494672 INTS5Q6P9B9 1019 aaKnown RBP8.39□□□□□ -1.07
CCDC66-222ENST00000494672 ZDHHC13Q8IUH4 622 aa8.39□□□□□ -1.07
CCDC66-222ENST00000494672 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
CCDC66-222ENST00000494672 TIAF1O95411 115 aa8.38□□□□□ -1.07
CCDC66-222ENST00000494672 DLGAP3O95886 979 aa8.38□□□□□ -1.07
CCDC66-222ENST00000494672 TGFB1P01137 390 aa8.38□□□□□ -1.07
CCDC66-222ENST00000494672 CD97P48960 835 aa8.38□□□□□ -1.07
CCDC66-222ENST00000494672 POU4F3Q15319 338 aa8.38□□□□□ -1.07
CCDC66-222ENST00000494672 GIMAP7Q8NHV1 300 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms