RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 FPGT-TNNI3KV9GXZ4 949 aa19.42■□□□□ 0.7
SYP-208ENST00000494396 NUP98P52948 1817 aa19.42■□□□□ 0.7
SYP-208ENST00000494396 COL5A3P25940 1745 aaPredicted RBP19.41■□□□□ 0.7
SYP-208ENST00000494396 GOLGA6L19H0YKK7 550 aa19.41■□□□□ 0.7
SYP-208ENST00000494396 QTRT2Q9H974 415 aaKnown RBP19.41■□□□□ 0.7
SYP-208ENST00000494396 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
SYP-208ENST00000494396 MYH14Q7Z406 1995 aaKnown RBP19.41■□□□□ 0.7
SYP-208ENST00000494396 SLC20A2Q08357 652 aa19.4■□□□□ 0.7
SYP-208ENST00000494396 CCDC57Q2TAC2 916 aa19.4■□□□□ 0.7
SYP-208ENST00000494396 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
SYP-208ENST00000494396 LEO1Q8WVC0 666 aaPredicted RBP19.4■□□□□ 0.7
SYP-208ENST00000494396 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
SYP-208ENST00000494396 LINC00116Q8NCU8 138 aa19.4■□□□□ 0.7
SYP-208ENST00000494396 CSF1RP07333 972 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 IL15P40933 162 aaPredicted RBP19.39■□□□□ 0.69
SYP-208ENST00000494396 GSDMDP57764 484 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 CAMK4Q16566 473 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 DBNLQ9UJU6 430 aaKnown RBP19.39■□□□□ 0.69
SYP-208ENST00000494396 BTAF1O14981 1849 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 UBN2Q6ZU65 1347 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 EYA2O00167 538 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 CIAO1O76071 339 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
SYP-208ENST00000494396 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
SYP-208ENST00000494396 NRBP1Q9UHY1 535 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
SYP-208ENST00000494396 IRS4O14654 1257 aaPredicted RBP19.38■□□□□ 0.69
SYP-208ENST00000494396 KCNJ6P48051 423 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 CDC37L1Q7L3B6 337 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 MAP4K1Q92918 833 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 TIGD1Q96MW7 591 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 TSPYL1Q9H0U9 437 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
SYP-208ENST00000494396 SLU7O95391 586 aaKnown RBP19.37■□□□□ 0.69
SYP-208ENST00000494396 ATP5JP18859 108 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 ADCK5Q3MIX3 580 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 TPRNQ4KMQ1 711 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 CKAP2LQ8IYA6 745 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 SYNE4Q8N205 404 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 IFIT5Q13325 482 aaKnown RBP19.37■□□□□ 0.69
SYP-208ENST00000494396 BMS1Q14692 1282 aaKnown RBP19.37■□□□□ 0.69
SYP-208ENST00000494396 STX1AQ16623 288 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 KMT5BQ4FZB7 885 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 ZNF594Q96JF6 807 aaPredicted RBP19.37■□□□□ 0.69
SYP-208ENST00000494396 IMPACTQ9P2X3 320 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 ZNF652Q9Y2D9 606 aa19.37■□□□□ 0.69
SYP-208ENST00000494396 CTSWP56202 376 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 KCNQ4P56696 695 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 IQCB1Q15051 598 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 CREB3L3Q68CJ9 461 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 BBXQ8WY36 941 aaPredicted RBP19.36■□□□□ 0.69
SYP-208ENST00000494396 GPR108Q9NPR9 543 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 PTH1RQ03431 593 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
SYP-208ENST00000494396 AK7Q96M32 723 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 FSD1Q9BTV5 496 aa19.36■□□□□ 0.69
SYP-208ENST00000494396 PDE8AO60658 829 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 SKILP12757 684 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 TAF7LQ5H9L4 462 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 BLOC1S2Q6QNY1 142 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 TTLL11Q8NHH1 800 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 BICD2Q8TD16 824 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 DBNDD2Q9BQY9 259 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 LARP6Q9BRS8 491 aaKnown RBP19.35■□□□□ 0.69
SYP-208ENST00000494396 DNAJC25Q9H1X3 360 aa19.35■□□□□ 0.69
SYP-208ENST00000494396 CCNL1Q9UK58 526 aaPredicted RBP19.35■□□□□ 0.69
SYP-208ENST00000494396 ZNF215Q9UL58 517 aaPredicted RBP19.35■□□□□ 0.69
SYP-208ENST00000494396 CPA1P15085 419 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 NMIQ13287 307 aaPredicted RBP19.34■□□□□ 0.69
SYP-208ENST00000494396 CLEC4GQ6UXB4 293 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 CCDC85AQ96PX6 553 aaPredicted RBP19.34■□□□□ 0.69
SYP-208ENST00000494396 UTP14AQ9BVJ6 771 aaKnown RBP19.34■□□□□ 0.69
SYP-208ENST00000494396 TMEM51Q9NW97 253 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 RBM8AQ9Y5S9 174 aaKnown RBP19.34■□□□□ 0.69
SYP-208ENST00000494396 SH3TC1Q8TE82 1336 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 KRT32Q14532 448 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 CCDC144BQ3MJ40 725 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 SUSD4Q5VX71 490 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 CCAR2Q8N163 923 aaKnown RBP19.34■□□□□ 0.69
SYP-208ENST00000494396 L2HGDHQ9H9P8 463 aa19.34■□□□□ 0.69
SYP-208ENST00000494396 NIP7Q9Y221 180 aaKnown RBP eCLIP19.34■□□□□ 0.69
SYP-208ENST00000494396 NR1I2O75469 434 aa19.33■□□□□ 0.69
SYP-208ENST00000494396 NRDCO43847 1150 aa19.32■□□□□ 0.68
SYP-208ENST00000494396 RPS6KB1P23443 525 aa19.32■□□□□ 0.68
SYP-208ENST00000494396 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
SYP-208ENST00000494396 KCNJ4P48050 445 aa19.32■□□□□ 0.68
SYP-208ENST00000494396 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
SYP-208ENST00000494396 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms