RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 MYO3BQ8WXR4 1341 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 IFIT3O14879 490 aaKnown RBP7.37□□□□□ -1.23
NF1-215ENST00000493220 PLSCR1O15162 318 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 TXLNAP40222 546 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 SMC5Q8IY18 1101 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 TAOK3Q9H2K8 898 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 WWC3Q9ULE0 1092 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 SKOR2Q2VWA4 1001 aaPredicted RBP7.37□□□□□ -1.23
NF1-215ENST00000493220 DCPSQ96C86 337 aaKnown RBP7.37□□□□□ -1.23
NF1-215ENST00000493220 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 KAT6BQ8WYB5 2073 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 CALM1P0DP23 149 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CALM2P0DP24 149 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CALM3P0DP25 149 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 STYK1Q6J9G0 422 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 DRC7Q8IY82 874 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 SDSP20132 328 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 COA1Q9GZY4 146 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CCDC171Q6TFL3 1326 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 MCM5P33992 734 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 GNAQP50148 359 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 EIF5P55010 431 aaKnown RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 ZFP91Q96JP5 570 aaPredicted RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 TNNQ9UQP3 1299 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 BCL9O00512 1426 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 TRIM28Q13263 835 aaKnown RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 HLFQ16534 295 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 FOXD4L5Q5VV16 416 aaPredicted RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 FOXD4L4Q8WXT5 416 aaPredicted RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 CDK5RAP3Q96JB5 506 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 MTFR1LQ9H019 292 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 MCM9Q9NXL9 1143 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CHMP5Q9NZZ3 219 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CAMTA1Q9Y6Y1 1673 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CAMTA2O94983 1202 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 PDE8BO95263 885 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 ATP5JP18859 108 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 ZNF76P36508 570 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 SSRP1Q08945 709 aaKnown RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 NMIQ13287 307 aaPredicted RBP7.36□□□□□ -1.23
NF1-215ENST00000493220 TMEM67Q5HYA8 995 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 JMYQ8N9B5 988 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
NF1-215ENST00000493220 B4DLN1 442 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 MRPL12P52815 198 aaKnown RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 NFIXQ14938 502 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 L1TD1Q5T7N2 865 aaKnown RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 PLA2G12BQ9BX93 195 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 TMOD4Q9NZQ9 345 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 CEP131Q9UPN4 1083 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 SETD1AO15047 1707 aaKnown RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 GTF2IP78347 998 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 DCAF15Q66K64 600 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 APPBP2Q92624 585 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 NEK1Q96PY6 1258 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 IBTKQ9P2D0 1353 aaPredicted RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 KDM6AO15550 1401 aaPredicted RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 MSNP26038 577 aaKnown RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 MFSD14BQ5SR56 506 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 AS3MTQ9HBK9 375 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 PNMA6EA0A0J9YXQ4 647 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 K7ELQ4 463 aaPredicted RBP7.35□□□□□ -1.23
NF1-215ENST00000493220 ITPK1Q13572 414 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 DBNDD2Q9BQY9 259 aa7.35□□□□□ -1.23
NF1-215ENST00000493220 TIMM10P62072 90 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 WTAPQ15007 396 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 EAPPQ56P03 285 aaPredicted RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 IFIT1BQ5T764 474 aaKnown RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 TTLL5Q6EMB2 1281 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 TTF2Q9UNY4 1162 aaKnown RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 ATRNO75882 1429 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 MBD4O95243 580 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 ESYT1Q9BSJ8 1104 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 FOSBP53539 338 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 ANAPC15P60006 121 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 HMGN5P82970 282 aaKnown RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 STK3Q13188 491 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 CIAPIN1Q6FI81 312 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 ZNF34Q8IZ26 560 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 ARPP21Q9UBL0 812 aaPredicted RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 LTN1O94822 1766 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 PSDA5PKW4 1024 aaPredicted RBP7.34□□□□□ -1.23
NF1-215ENST00000493220 TGFB2P61812 414 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 WWC2Q6AWC2 1192 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 CNPY4Q8N129 248 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 MIGA1Q8NAN2 632 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
NF1-215ENST00000493220 USP17L3A6NCW0 530 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 USP17L4A6NCW7 530 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 CCDC73Q6ZRK6 1079 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms