RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
CSMD3-206ENST00000492692 PIK3R4Q99570 1358 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 F8VZ95 297 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 E2F6O75461 281 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 CAVIN2O95810 425 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 SLC8A1P32418 973 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 USP5P45974 858 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 CCZ1BP86790 482 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 CCZ1P86791 482 aaPredicted RBP12.73□□□□□ -0.37
CSMD3-206ENST00000492692 KCNB1Q14721 858 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 CEP85LQ5SZL2 805 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 IQCF2Q8IXL9 164 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
CSMD3-206ENST00000492692 EPAS1Q99814 870 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 CORO1CQ9ULV4 474 aaPredicted RBP12.73□□□□□ -0.37
CSMD3-206ENST00000492692 PCDHGC5Q9Y5F6 944 aa12.73□□□□□ -0.37
CSMD3-206ENST00000492692 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 EVCP57679 992 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 PSMC1P62191 440 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 CCDC114Q96M63 670 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 SPATA7Q9P0W8 599 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 RASSF9O75901 435 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 TRPC1P48995 793 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 TUBB4BP68371 445 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 CAPRIN2Q6IMN6 1127 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 PHC3Q8NDX5 983 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
CSMD3-206ENST00000492692 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
CSMD3-206ENST00000492692 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
CSMD3-206ENST00000492692 QRICH2Q9H0J4 1663 aa12.71□□□□□ -0.37
CSMD3-206ENST00000492692 MTHFSP49914 203 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 GSDMDP57764 484 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 SESN3P58005 492 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 RHBDL3P58872 404 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 RBM41Q96IZ5 413 aaKnown RBP12.71□□□□□ -0.38
CSMD3-206ENST00000492692 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.38
CSMD3-206ENST00000492692 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.38
CSMD3-206ENST00000492692 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.38
CSMD3-206ENST00000492692 MSH6P52701 1360 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 SYT1P21579 422 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 YY1P25490 414 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC38Q502W7 563 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 B4GALNT4Q76KP1 1039 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
CSMD3-206ENST00000492692 TSPYL2Q9H2G4 693 aaPredicted RBP12.7□□□□□ -0.38
CSMD3-206ENST00000492692 WDR37Q9Y2I8 494 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 ABCC1P33527 1531 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
CSMD3-206ENST00000492692 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 VDRP11473 427 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 PAPOLAP51003 745 aaKnown RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 ETF1P62495 437 aaKnown RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 DRP2Q13474 957 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC144BQ3MJ40 725 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 CACTIN-AS1Q8N1I8 211 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 TRIM5Q9C035 493 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 SMARCA5O60264 1052 aaPredicted RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 KIF5CO60282 957 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 RNF8O76064 485 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 TUBBP07437 444 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 HARSP12081 509 aaKnown RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 GBP2P32456 591 aaPredicted RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 TAF7Q15545 349 aaPredicted RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 SNCBQ16143 134 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 PKN1Q16512 942 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 KBTBD12Q3ZCT8 623 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms