RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	YBX3	P16989	372 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
TRO-223	ENST00000492142	ARID4A	P29374	1257 aa	Predicted RBP	11.88	□□□□□ -0.51
TRO-223	ENST00000492142	FXR2	P51116	673 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
TRO-223	ENST00000492142	DNAJC2	Q99543	621 aa	Known RBP	11.88	□□□□□ -0.51
TRO-223	ENST00000492142	TAOK3	Q9H2K8	898 aa		11.88	□□□□□ -0.51
TRO-223	ENST00000492142	CD209	Q9NNX6	404 aa		11.88	□□□□□ -0.51
TRO-223	ENST00000492142	MED23	Q9ULK4	1368 aa		11.88	□□□□□ -0.51
TRO-223	ENST00000492142	ARAP2	Q8WZ64	1704 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	TRIM6-TRIM34	B2RNG4	842 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	MCAM	P43121	646 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	RASSF7	Q02833	373 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	KIAA2012	Q0VF49	1180 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	CHAF1A	Q13111	956 aa	Predicted RBP	11.87	□□□□□ -0.51
TRO-223	ENST00000492142	RASGRF1	Q13972	1273 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	GPR162	Q16538	588 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	PI16	Q6UXB8	463 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	LARGE2	Q8N3Y3	721 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	SPATA5	Q8NB90	893 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
TRO-223	ENST00000492142	RILPL2	Q969X0	211 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	EDC3	Q96F86	508 aa	Known RBP	11.87	□□□□□ -0.51
TRO-223	ENST00000492142	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.87	□□□□□ -0.51
TRO-223	ENST00000492142	HAUS7	Q99871	368 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	COA1	Q9GZY4	146 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	DBNDD1	Q9H9R9	158 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	HMG20B	Q9P0W2	317 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	JAG2	Q9Y219	1238 aa		11.87	□□□□□ -0.51
TRO-223	ENST00000492142	ARFGEF1	Q9Y6D6	1849 aa		11.86	□□□□□ -0.51
TRO-223	ENST00000492142	GOLIM4	O00461	696 aa		11.86	□□□□□ -0.51
TRO-223	ENST00000492142	GSPT1	P15170	499 aa	Known RBP	11.86	□□□□□ -0.51
TRO-223	ENST00000492142	SDS	P20132	328 aa		11.86	□□□□□ -0.51
TRO-223	ENST00000492142	IARS	P41252	1262 aa	Known RBP	11.86	□□□□□ -0.51
TRO-223	ENST00000492142	ZAP70	P43403	619 aa		11.86	□□□□□ -0.51
TRO-223	ENST00000492142	TDRD7	Q8NHU6	1098 aa	Known RBP	11.86	□□□□□ -0.51
TRO-223	ENST00000492142	DENND2A	Q9ULE3	1009 aa		11.86	□□□□□ -0.51
TRO-223	ENST00000492142	FER1L6	Q2WGJ9	1857 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	SEMA3E	O15041	775 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	ECE2	O60344	883 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	IL1R1	P14778	569 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	TBC1D9	Q6ZT07	1266 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	FBXW7	Q969H0	707 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	VPS33B	Q9H267	617 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	KCNQ5	Q9NR82	932 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	PAG1	Q9NWQ8	432 aa		11.85	□□□□□ -0.51
TRO-223	ENST00000492142	CYP2E1	P05181	493 aa	Predicted RBP	11.84	□□□□□ -0.51
TRO-223	ENST00000492142	PRELP	P51888	382 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	GTF2I	P78347	998 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	BMP2KL	Q5H9B9	411 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	NIM1K	Q8IY84	436 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	CNTROB	Q8N137	903 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	ANTXR1	Q9H6X2	564 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	CHD4	Q14839	1912 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	AKAP11	Q9UKA4	1901 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	LTBP3	Q9NS15	1303 aa		11.84	□□□□□ -0.51
TRO-223	ENST00000492142	PODN	Q7Z5L7	613 aa		11.83	□□□□□ -0.52
TRO-223	ENST00000492142	JDP2	Q8WYK2	163 aa		11.83	□□□□□ -0.52
TRO-223	ENST00000492142	EVI5L	Q96CN4	794 aa		11.83	□□□□□ -0.52
TRO-223	ENST00000492142	FSD1	Q9BTV5	496 aa		11.83	□□□□□ -0.52
TRO-223	ENST00000492142	PIH1D3	Q9NQM4	214 aa	Known RBP	11.83	□□□□□ -0.52
TRO-223	ENST00000492142	SRCAP	Q6ZRS2	3230 aa		11.83	□□□□□ -0.52
TRO-223	ENST00000492142	YDJC	A8MPS7	323 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	RAD17	O75943	681 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	TTLL5	Q6EMB2	1281 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	WDR66	Q8TBY9	1149 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	MXD3	Q9BW11	206 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	LRP2BP	Q9P2M1	347 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	ABCF2	Q9UG63	623 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	ZNRF3	Q9ULT6	936 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	CCDC88A	Q3V6T2	1871 aa		11.82	□□□□□ -0.52
TRO-223	ENST00000492142	COL1A1	P02452	1464 aa	Predicted RBP	11.82	□□□□□ -0.52
TRO-223	ENST00000492142	USP17L3	A6NCW0	530 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	USP17L4	A6NCW7	530 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	GRIN3B	O60391	1043 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	IDH1	O75874	414 aa	Known RBP	11.81	□□□□□ -0.52
TRO-223	ENST00000492142	LMNB1	P20700	586 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	TTF1	Q15361	905 aa	Predicted RBP	11.81	□□□□□ -0.52
TRO-223	ENST00000492142	USP17L1	Q7RTZ2	530 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	KBTBD3	Q8NAB2	608 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	RAI14	Q9P0K7	980 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	MYH13	Q9UKX3	1938 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	FAM205A	Q6ZU69	1335 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	COL4A5	P29400	1685 aa		11.81	□□□□□ -0.52
TRO-223	ENST00000492142	GRIK5	Q16478	980 aa		11.8	□□□□□ -0.52
TRO-223	ENST00000492142	MFSD14B	Q5SR56	506 aa		11.8	□□□□□ -0.52
TRO-223	ENST00000492142	ERICH6	Q7L0X2	663 aa		11.8	□□□□□ -0.52
TRO-223	ENST00000492142	RNF181	Q9P0P0	153 aa		11.8	□□□□□ -0.52
TRO-223	ENST00000492142	PDS5A	Q29RF7	1337 aa	Known RBP	11.8	□□□□□ -0.52
TRO-223	ENST00000492142	SCN9A	Q15858	1988 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.79	□□□□□ -0.52
TRO-223	ENST00000492142	CHGB	P05060	677 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	LDHB	P07195	334 aa	Known RBP	11.79	□□□□□ -0.52
TRO-223	ENST00000492142	CXCL9	Q07325	125 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	MAP3K12	Q12852	859 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	SLFNL1	Q499Z3	407 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	STRIP1	Q5VSL9	837 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	C9orf131	Q5VYM1	1079 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.79	□□□□□ -0.52
TRO-223	ENST00000492142	ZGPAT	Q8N5A5	531 aa	Known RBP	11.79	□□□□□ -0.52
TRO-223	ENST00000492142	TBC1D22A	Q8WUA7	517 aa		11.79	□□□□□ -0.52
TRO-223	ENST00000492142	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms