RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 WDR64B1ANS9 1081 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 SOX1O00570 391 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 COBLO75128 1261 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 KIF4AO95239 1232 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 WISP1O95388 367 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 IGLV1-40P01703 118 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 SERPINB4P48594 390 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 PDE3BQ13370 1112 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 PDE3AQ14432 1141 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 FOXD4L6Q3SYB3 417 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 EXOSC6Q5RKV6 272 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 ANKRD34AQ69YU3 496 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 FOXD4L3Q6VB84 417 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 DYMQ7RTS9 669 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 NXPE3Q969Y0 559 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 YIPF2Q9BWQ6 316 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 ADAM19Q9H013 955 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 C1orf115Q9H7X2 142 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 LIN7BQ9HAP6 207 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 ZFYVE1Q9HBF4 777 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 LGR6Q9HBX8 967 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 ZFYVE28Q9HCC9 887 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 OSGEPQ9NPF4 335 aa3.23□□□□□ -1.89
SNRNP40-207ENST00000491106 METTL12A8MUP2 240 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 EIF4EBP3O60516 100 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 CYP11A1P05108 521 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 HOXD8P13378 290 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 DRD2P14416 443 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 ZNF157P51786 506 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 LRP8Q14114 963 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 AKAP4Q5JQC9 854 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 HGSNATQ68CP4 663 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 PAOXQ6QHF9 649 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 KIAA1211Q6ZU35 1233 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 SLC51AQ86UW1 340 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 CLEC10AQ8IUN9 316 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 DZIP1LQ8IYY4 767 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 TMEM102Q8N9M5 508 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 WNT8BQ93098 351 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 MFSD14AQ96MC6 490 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 CORO1BQ9BR76 489 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 OSBPL1AQ9BXW6 950 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 NIF3L1Q9GZT8 377 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 SSU72Q9NP77 194 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 LATS2Q9NRM7 1088 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 NLRP2Q9NX02 1062 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 RNF112Q9ULX5 631 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 LEMD3Q9Y2U8 911 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 SHROOM4Q9ULL8 1493 aa3.22□□□□□ -1.89
SNRNP40-207ENST00000491106 A0A096LPE4 126 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 FAM95CA0A1B0GW59 222 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 A0A1W2PPZ6 126 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 FZD6O60353 706 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 ICMTO60725 284 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 RNGTTO60942 597 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 CPNE3O75131 537 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 TGFB1P01137 390 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 RAB6AP20340 208 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 ITGB7P26010 798 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 MAP4P27816 1152 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 NFIAQ12857 509 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 POU4F3Q15319 338 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 SPRED3Q2MJR0 410 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 UVSSAQ2YD98 709 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 HP1BP3Q5SSJ5 553 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 DUSP27Q5VZP5 1158 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 ARHGAP27Q6ZUM4 889 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 FOXD4L4Q8WXT5 416 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 FAM83CQ9BQN1 747 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 SSBP4Q9BWG4 385 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 ZC3H12CQ9C0D7 883 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 C7orf69Q9H7B7 122 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 PICK1Q9NRD5 415 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 AP4E1Q9UPM8 1137 aa3.21□□□□□ -1.9
SNRNP40-207ENST00000491106 ADAM11O75078 769 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 MAOBP27338 520 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 ZEB1P37275 1124 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 PREPP48147 710 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 IRAK1P51617 712 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 HNRNPUQ00839 825 aaKnown RBP eCLIP3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 PLCB3Q01970 1234 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 PCDH1Q08174 1060 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 SGO2Q562F6 1265 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 RNF43Q68DV7 783 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 INTS5Q6P9B9 1019 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 ADAMTSL4Q6UY14 1074 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 DTHD1Q6ZMT9 781 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 ILDR2Q71H61 639 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 FAM20CQ8IXL6 584 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 SHKBP1Q8TBC3 707 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 FBLIM1Q8WUP2 373 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 MYRFLQ96LU7 910 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 TBC1D32Q96NH3 1257 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 CHRDQ9H2X0 955 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 CLEC4MQ9H2X3 399 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 LRRC4CQ9HCJ2 640 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 ANGEL1Q9UNK9 670 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 USTQ9Y2C2 406 aa3.2□□□□□ -1.9
SNRNP40-207ENST00000491106 AKAP2Q9Y2D5 859 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms