RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 SUPT16HQ9Y5B9 1047 aaKnown RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 DNMT3AQ9Y6K1 912 aaPredicted RBP6.29□□□□□ -1.4
EPCAM-206ENST00000490733 CACNA1FO60840 1977 aa6.29□□□□□ -1.4
EPCAM-206ENST00000490733 APBB1O00213 710 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 EXOC5O00471 708 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 LILRA1O75019 489 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 ADAM23O75077 832 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 VAMP4O75379 141 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
EPCAM-206ENST00000490733 FOXK2Q01167 660 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 SEPT12Q8IYM1 358 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 QTRT2Q9H974 415 aaKnown RBP6.28□□□□□ -1.4
EPCAM-206ENST00000490733 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 BABAM1Q9NWV8 329 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 DNMT3LQ9UJW3 386 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 TRPC5Q9UL62 973 aaPredicted RBP6.28□□□□□ -1.4
EPCAM-206ENST00000490733 HEG1Q9ULI3 1381 aa6.28□□□□□ -1.4
EPCAM-206ENST00000490733 KCPQ6ZWJ8 1503 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 ERVV-2B6SEH9 535 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 H3BM21 787 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
EPCAM-206ENST00000490733 SPINT1O43278 529 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 MAN1A2O60476 641 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 BCAR3O75815 825 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 HSP90AB1P08238 724 aaKnown RBP6.27□□□□□ -1.41
EPCAM-206ENST00000490733 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
EPCAM-206ENST00000490733 TEFQ10587 303 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 SLC39A6Q13433 755 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 DDB1Q16531 1140 aa6.27□□□□□ -1.41
EPCAM-206ENST00000490733 LAMB4A4D0S4 1761 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 BCL9O00512 1426 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 EIF4A1P60842 406 aaKnown RBP6.26□□□□□ -1.41
EPCAM-206ENST00000490733 RELBQ01201 579 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 TWISTNBQ3B726 338 aaPredicted RBP6.26□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF790Q6PG37 636 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 SSH1Q8WYL5 1049 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 PIGBQ92521 554 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 BCL2L13Q9BXK5 485 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 BTAF1O14981 1849 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 NHSQ6T4R5 1651 aa6.26□□□□□ -1.41
EPCAM-206ENST00000490733 ERBB4Q15303 1308 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 PRAMEF22A3QJZ6 481 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 TTLL8A6PVC2 850 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 PLIN1O60240 522 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 ADH1AP07327 375 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 CT47B1P0C2W7 299 aaPredicted RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 RRP1P56182 461 aaKnown RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 CABP4P57796 275 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 IRF5Q13568 498 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 FAM182BQ5T319 152 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF772Q68DY9 489 aaPredicted RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 POTEAQ6S8J7 498 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 PTF1AQ7RTS3 328 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 KDF1Q8NAX2 398 aaPredicted RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF496Q96IT1 587 aaPredicted RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF395Q9H8N7 513 aaPredicted RBP6.25□□□□□ -1.41
EPCAM-206ENST00000490733 CYLDQ9NQC7 956 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 TNNQ9UQP3 1299 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 TJP1Q07157 1748 aa6.25□□□□□ -1.41
EPCAM-206ENST00000490733 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 KCNQ2O43526 872 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 CTSOP43234 321 aaPredicted RBP6.24□□□□□ -1.41
EPCAM-206ENST00000490733 RBM6P78332 1123 aaKnown RBP6.24□□□□□ -1.41
EPCAM-206ENST00000490733 IRX6P78412 446 aaPredicted RBP6.24□□□□□ -1.41
EPCAM-206ENST00000490733 MCM6Q14566 821 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 C20orf194Q5TEA3 1177 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 Q8N3U1 123 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 ACSBG1Q96GR2 724 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 INSM2Q96T92 566 aaPredicted RBP6.24□□□□□ -1.41
EPCAM-206ENST00000490733 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 ATG3Q9NT62 314 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
EPCAM-206ENST00000490733 RGS12O14924 1447 aa6.24□□□□□ -1.41
EPCAM-206ENST00000490733 LY75O60449 1722 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
EPCAM-206ENST00000490733 ALDH1L2Q3SY69 923 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 G2E3Q7L622 706 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 SLC4A9Q96Q91 983 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 SMC4Q9NTJ3 1288 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 TMOD3Q9NYL9 352 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 CICQ96RK0 1608 aaPredicted RBP6.23□□□□□ -1.41
EPCAM-206ENST00000490733 MYH14Q7Z406 1995 aaKnown RBP6.23□□□□□ -1.41
EPCAM-206ENST00000490733 N4BP2Q86UW6 1770 aaPredicted RBP6.23□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF831Q5JPB2 1677 aa6.23□□□□□ -1.41
EPCAM-206ENST00000490733 SOS1Q07889 1333 aaPredicted RBP6.23□□□□□ -1.41
EPCAM-206ENST00000490733 COL5A3P25940 1745 aaPredicted RBP6.22□□□□□ -1.41
EPCAM-206ENST00000490733 HOXB7P09629 217 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 RLBP1P12271 317 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 PTGIRP43119 386 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 PROSER3Q2NL68 480 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.22□□□□□ -1.416e-8■□□□□ 9
EPCAM-206ENST00000490733 RNF20Q5VTR2 975 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms