RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 TAL1P17542 331 aaPredicted RBP7.06□□□□□ -1.28
RBM39-235ENST00000490354 PTPRAP18433 802 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 RNF43Q68DV7 783 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 NCAPG2Q86XI2 1143 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 DBNDD2Q9BQY9 259 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 ADAM19Q9H013 955 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 SEC31BQ9NQW1 1179 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 TMEM63CQ9P1W3 806 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 KANSL3Q9P2N6 904 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 CLIP1P30622 1438 aa7.06□□□□□ -1.28
RBM39-235ENST00000490354 SNAPC4Q5SXM2 1469 aa7.05□□□□□ -1.28
RBM39-235ENST00000490354 PRR19A6NJB7 356 aa7.05□□□□□ -1.28
RBM39-235ENST00000490354 SPINK2P20155 84 aa7.05□□□□□ -1.28
RBM39-235ENST00000490354 INTS5Q6P9B9 1019 aaKnown RBP7.05□□□□□ -1.28
RBM39-235ENST00000490354 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
RBM39-235ENST00000490354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.05□□□□□ -1.28
RBM39-235ENST00000490354 SYNJ2O15056 1496 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.04□□□□□ -1.28
RBM39-235ENST00000490354 FAM177BA6PVY3 158 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 GRIK1P39086 918 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 TXKP42681 527 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 RANGAP1P46060 587 aaPredicted RBP7.04□□□□□ -1.28
RBM39-235ENST00000490354 SRPK2P78362 688 aaKnown RBP7.04□□□□□ -1.28
RBM39-235ENST00000490354 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 FAM20CQ8IXL6 584 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 ABTB2Q8N961 1025 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 ELP3Q9H9T3 547 aa7.04□□□□□ -1.28
RBM39-235ENST00000490354 H3BRJ5 948 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
RBM39-235ENST00000490354 BMP3P12645 472 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 ACPPP15309 386 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 PREPP48147 710 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 PDE12Q6L8Q7 609 aaKnown RBP7.03□□□□□ -1.28
RBM39-235ENST00000490354 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.03□□□□□ -1.28
RBM39-235ENST00000490354 CLEC10AQ8IUN9 316 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 NUDT16Q96DE0 195 aaKnown RBP7.03□□□□□ -1.28
RBM39-235ENST00000490354 FAM83CQ9BQN1 747 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 CNTN3Q9P232 1028 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 EIF4G3O43432 1585 aaKnown RBP7.03□□□□□ -1.28
RBM39-235ENST00000490354 CUL7Q14999 1698 aa7.03□□□□□ -1.28
RBM39-235ENST00000490354 ATG7O95352 703 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 ATCAYQ86WG3 371 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 SHKBP1Q8TBC3 707 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 SALL4Q9UJQ4 1053 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 GRIN2AQ12879 1464 aa7.02□□□□□ -1.29
RBM39-235ENST00000490354 KIAA0586Q9BVV6 1533 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 ADAMTS12P58397 1594 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 NFKBIEO00221 500 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 CABP4P57796 275 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 NLRP12P59046 1061 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 ANKRD34AQ69YU3 496 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 SLC7A3Q8WY07 619 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 CLP1Q92989 425 aaKnown RBP7.01□□□□□ -1.29
RBM39-235ENST00000490354 WNT8BQ93098 351 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 RNF208Q9H0X6 261 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 NUP160Q12769 1436 aa7.01□□□□□ -1.29
RBM39-235ENST00000490354 TRPA1O75762 1119 aa7□□□□□ -1.29
RBM39-235ENST00000490354 C1orf127Q8N9H9 656 aa7□□□□□ -1.29
RBM39-235ENST00000490354 RUSC1Q9BVN2 902 aa7□□□□□ -1.29
RBM39-235ENST00000490354 DZANK1Q9NVP4 752 aa7□□□□□ -1.29
RBM39-235ENST00000490354 SEPT3Q9UH03 358 aa7□□□□□ -1.29
RBM39-235ENST00000490354 RNF114Q9Y508 228 aa7□□□□□ -1.29
RBM39-235ENST00000490354 ARHGAP35Q9NRY4 1499 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 WDR64B1ANS9 1081 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 WNT11O96014 354 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 HGSNATQ68CP4 663 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 FDX2Q6P4F2 183 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 EDEM1Q92611 657 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
RBM39-235ENST00000490354 A6NHS1 94 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
RBM39-235ENST00000490354 CES1P23141 567 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 HOXA10P31260 410 aaPredicted RBP6.98□□□□□ -1.29
RBM39-235ENST00000490354 XKR5Q6UX68 686 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 VPS8Q8N3P4 1428 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 ARAP1Q96P48 1450 aa6.98□□□□□ -1.29
RBM39-235ENST00000490354 GAS2O43903 313 aaKnown RBP6.97□□□□□ -1.29
RBM39-235ENST00000490354 YBX3P16989 372 aaKnown RBP eCLIP6.97□□□□□ -1.29
RBM39-235ENST00000490354 SGO2Q562F6 1265 aa6.97□□□□□ -1.29
RBM39-235ENST00000490354 ATP2B4P23634 1241 aa6.96□□□□□ -1.3
RBM39-235ENST00000490354 ARL4DP49703 201 aa6.96□□□□□ -1.3
RBM39-235ENST00000490354 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.3
RBM39-235ENST00000490354 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
RBM39-235ENST00000490354 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
RBM39-235ENST00000490354 MAP4P27816 1152 aaKnown RBP6.95□□□□□ -1.3
RBM39-235ENST00000490354 C19orf57Q0VDD7 668 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms