RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 PCDHGA11Q9Y5H2 935 aa7.06□□□□□ -1.28
ATG4A-208ENST00000489247 CEMIPQ8WUJ3 1361 aa7.06□□□□□ -1.28
ATG4A-208ENST00000489247 LMO7Q8WWI1 1683 aa7.06□□□□□ -1.28
ATG4A-208ENST00000489247 NPHP3Q7Z494 1330 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 FOXO3O43524 673 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 MAN1A2O60476 641 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 SCNN1DP51172 638 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 RNF217Q8TC41 542 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 DDX19BQ9UMR2 479 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 CPDO75976 1380 aa7.05□□□□□ -1.28
ATG4A-208ENST00000489247 ABCC4O15439 1325 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 TNS3Q68CZ2 1445 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 GNRH1P01148 92 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 CANXP27824 592 aaKnown RBP7.04□□□□□ -1.28
ATG4A-208ENST00000489247 GTF2IP78347 998 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 CLN3Q13286 438 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 HDAC1Q13547 482 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-208ENST00000489247 TWISTNBQ3B726 338 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-208ENST00000489247 Q8N3U1 123 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 C8orf58Q8NAV2 365 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 THUMPD2Q9BTF0 503 aaKnown RBP7.04□□□□□ -1.28
ATG4A-208ENST00000489247 CHMP4BQ9H444 224 aaKnown RBP7.04□□□□□ -1.28
ATG4A-208ENST00000489247 KIAA1024Q9UPX6 916 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 NOD1Q9Y239 953 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 STRCQ7RTU9 1775 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 MAP3K5Q99683 1374 aa7.04□□□□□ -1.28
ATG4A-208ENST00000489247 SPATA31A3Q5VYP0 1347 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 CARNS1A5YM72 827 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 FAM83GA6ND36 823 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 HSPA2P54652 639 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 CLDN10P78369 228 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 NUTM2GQ5VZR2 741 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 TSPYL6Q8N831 410 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 FRAT1Q92837 279 aaPredicted RBP7.03□□□□□ -1.28
ATG4A-208ENST00000489247 CNKSR1Q969H4 720 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 API5Q9BZZ5 524 aaKnown RBP7.03□□□□□ -1.28
ATG4A-208ENST00000489247 ZBTB40Q9NUA8 1239 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
ATG4A-208ENST00000489247 NOB1Q9ULX3 412 aaKnown RBP7.03□□□□□ -1.28
ATG4A-208ENST00000489247 TNNQ9UQP3 1299 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 HRH3Q9Y5N1 445 aa7.03□□□□□ -1.28
ATG4A-208ENST00000489247 RGS12O14924 1447 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 TMEM229AB2RXF0 380 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 ZBTB7BO15156 539 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-208ENST00000489247 LZTS3O60299 673 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-208ENST00000489247 IGHDP01880 384 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 RNF144AP50876 292 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-208ENST00000489247 GDF10P55107 478 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 DCTN1Q14203 1278 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 AMOTQ4VCS5 1084 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 NBPF6Q5VWK0 638 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 FTSJ3Q8IY81 847 aaKnown RBP7.02□□□□□ -1.29
ATG4A-208ENST00000489247 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.29
ATG4A-208ENST00000489247 XAGE2Q96GT9 111 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 NBPF4Q96M43 638 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 ESYT1Q9BSJ8 1104 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 TRAIPQ9BWF2 469 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 BACH2Q9BYV9 841 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 VRTNQ9H8Y1 702 aa7.02□□□□□ -1.29
ATG4A-208ENST00000489247 PTPRCP08575 1304 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 ADAMTS7Q9UKP4 1686 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 HOXB7P09629 217 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 CSB-PGBD3P0DP91 1061 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 RHOQP17081 205 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 CENPCQ03188 943 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 INTS3Q68E01 1043 aaKnown RBP7.01□□□□□ -1.29
ATG4A-208ENST00000489247 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 MCM10Q7L590 875 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 TMEM57Q8N5G2 664 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 IL17REQ8NFR9 667 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 ANKRD24Q8TF21 1146 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 RWDD1Q9H446 243 aaPredicted RBP7.01□□□□□ -1.29
ATG4A-208ENST00000489247 SERTAD1Q9UHV2 236 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 DLG5Q8TDM6 1919 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 CRYBG1Q9Y4K1 1723 aa7.01□□□□□ -1.29
ATG4A-208ENST00000489247 LTN1O94822 1766 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 HEG1Q9ULI3 1381 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 ATG7O95352 703 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 INHAP05111 366 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 TAF7Q15545 349 aaPredicted RBP7□□□□□ -1.29
ATG4A-208ENST00000489247 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7□□□□□ -1.29
ATG4A-208ENST00000489247 AKAP4Q5JQC9 854 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 SMC5Q8IY18 1101 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 OGFOD1Q8N543 542 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 SERBP1Q8NC51 408 aaKnown RBP eCLIP7□□□□□ -1.29
ATG4A-208ENST00000489247 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
ATG4A-208ENST00000489247 CHMP4AQ9BY43 222 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
ATG4A-208ENST00000489247 GRIP2Q9C0E4 1043 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 COL18A1P39060 1754 aa7□□□□□ -1.29
ATG4A-208ENST00000489247 XIRP1Q702N8 1843 aaKnown RBP6.99□□□□□ -1.29
ATG4A-208ENST00000489247 MSTNO14793 375 aa6.99□□□□□ -1.29
ATG4A-208ENST00000489247 PTSQ03393 145 aa6.99□□□□□ -1.29
ATG4A-208ENST00000489247 POU4F2Q12837 409 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms