RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 DUOXA2Q1HG44 320 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 KIAA1211Q6ZU35 1233 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 SNX29Q8TEQ0 813 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 OSGEPQ9NPF4 335 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 DCTN4Q9UJW0 460 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 DHX15O43143 795 aaKnown RBP7.22□□□□□ -1.25
XRN1-213ENST00000489241 EHHADHQ08426 723 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 UBASH3BQ8TF42 649 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 UTP4Q969X6 686 aaKnown RBP7.22□□□□□ -1.25
XRN1-213ENST00000489241 KLHDC7BQ96G42 594 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 CITED4Q96RK1 184 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
XRN1-213ENST00000489241 PHACTR2O75167 634 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 TNFRSF21O75509 655 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 TMEM102Q8N9M5 508 aaPredicted RBP7.21□□□□□ -1.26
XRN1-213ENST00000489241 TMC1Q8TDI8 760 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 FAM46AQ96IP4 442 aaKnown RBP7.21□□□□□ -1.26
XRN1-213ENST00000489241 STOML1Q9UBI4 398 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 SOX13Q9UN79 622 aa7.21□□□□□ -1.26
XRN1-213ENST00000489241 E9PSI1 815 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
XRN1-213ENST00000489241 FZD6O60353 706 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 TRPA1O75762 1119 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 EDN3P14138 238 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 MAPK1P28482 360 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 PSMG3-AS1Q96PY0 264 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 CCDC87Q9NVE4 849 aa7.2□□□□□ -1.26
XRN1-213ENST00000489241 EREGO14944 169 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 ANKRD34AQ69YU3 496 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
XRN1-213ENST00000489241 ZSCAN29Q8IWY8 852 aaPredicted RBP7.19□□□□□ -1.26
XRN1-213ENST00000489241 SLC7A3Q8WY07 619 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 MYRFLQ96LU7 910 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 OSMRQ99650 979 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 ZKSCAN3Q9BRR0 538 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 RNF208Q9H0X6 261 aa7.19□□□□□ -1.26
XRN1-213ENST00000489241 ARL4DP49703 201 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 NLRP12P59046 1061 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
XRN1-213ENST00000489241 GJD3Q8N144 294 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 BSNDQ8WZ55 320 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 NXPE3Q969Y0 559 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 RBCK1Q9BYM8 510 aa7.18□□□□□ -1.26
XRN1-213ENST00000489241 FOXD3Q9UJU5 478 aaPredicted RBP7.18□□□□□ -1.26
XRN1-213ENST00000489241 NEFLP07196 543 aa7.17□□□□□ -1.26
XRN1-213ENST00000489241 CD97P48960 835 aa7.17□□□□□ -1.26
XRN1-213ENST00000489241 C19orf57Q0VDD7 668 aa7.17□□□□□ -1.26
XRN1-213ENST00000489241 RUSC1Q9BVN2 902 aa7.17□□□□□ -1.26
XRN1-213ENST00000489241 BHLHE41Q9C0J9 482 aaPredicted RBP7.17□□□□□ -1.26
XRN1-213ENST00000489241 PCMTD2Q9NV79 361 aa7.17□□□□□ -1.26
XRN1-213ENST00000489241 SART1O43290 800 aaKnown RBP7.16□□□□□ -1.26
XRN1-213ENST00000489241 ERCC3P19447 782 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 NFIAQ12857 509 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 IKBKEQ14164 716 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 FDX2Q6P4F2 183 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 VN1R5Q7Z5H4 357 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 DMRTB1Q96MA1 342 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 C7orf69Q9H7B7 122 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 HIF3AQ9Y2N7 669 aa7.16□□□□□ -1.26
XRN1-213ENST00000489241 RBM47A0AV96 593 aaKnown RBP7.15□□□□□ -1.26
XRN1-213ENST00000489241 UNCXA6NJT0 531 aa7.15□□□□□ -1.26
XRN1-213ENST00000489241 SSTR4P31391 388 aa7.15□□□□□ -1.26
XRN1-213ENST00000489241 PREPP48147 710 aa7.15□□□□□ -1.26
XRN1-213ENST00000489241 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
XRN1-213ENST00000489241 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
XRN1-213ENST00000489241 SOX17Q9H6I2 414 aaPredicted RBP7.15□□□□□ -1.26
XRN1-213ENST00000489241 TGFB1P01137 390 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
XRN1-213ENST00000489241 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 RNF43Q68DV7 783 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 ZDHHC13Q8IUH4 622 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 TRIM42Q8IWZ5 723 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 ASAP3Q8TDY4 903 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 FAM129BQ96TA1 746 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 DBNDD2Q9BQY9 259 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 LATS2Q9NRM7 1088 aa7.14□□□□□ -1.27
XRN1-213ENST00000489241 HMX2A2RU54 273 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 MEGF11A6BM72 1044 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 SOX1O00570 391 aaPredicted RBP7.13□□□□□ -1.27
XRN1-213ENST00000489241 COBLO75128 1261 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 BMP3P12645 472 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 CLEC10AQ8IUN9 316 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 FAM83CQ9BQN1 747 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 ZFYVE28Q9HCC9 887 aa7.13□□□□□ -1.27
XRN1-213ENST00000489241 KIAA1324LA8MWY0 1029 aaPredicted RBP7.12□□□□□ -1.27
XRN1-213ENST00000489241 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
XRN1-213ENST00000489241 ESRRAP11474 423 aaPredicted RBP7.12□□□□□ -1.27
XRN1-213ENST00000489241 BEND4Q6ZU67 534 aa7.12□□□□□ -1.27
XRN1-213ENST00000489241 USP26Q9BXU7 913 aa7.12□□□□□ -1.27
XRN1-213ENST00000489241 KCNF1Q9H3M0 494 aa7.12□□□□□ -1.27
XRN1-213ENST00000489241 LOC100289279A0A1B0GTE1 492 aa7.11□□□□□ -1.27
XRN1-213ENST00000489241 ANKRD33BA6NCL7 494 aa7.11□□□□□ -1.27
XRN1-213ENST00000489241 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
XRN1-213ENST00000489241 GRIK1P39086 918 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms