RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SERTAD1Q9UHV2 236 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 HRH3Q9Y5N1 445 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 OVOS2A0A0G2JMS6 1433 aa8.77□□□□□ -1.01
SEC22C-215ENST00000487701 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
SEC22C-215ENST00000487701 USP17L3A6NCW0 530 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 USP17L4A6NCW7 530 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 IL2RBP14784 551 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
SEC22C-215ENST00000487701 PDE3BQ13370 1112 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 USP17L2Q6R6M4 530 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 USP17L1Q7RTZ2 530 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 MARCH10Q8NA82 808 aaPredicted RBP8.76□□□□□ -1.01
SEC22C-215ENST00000487701 CNTNAP3BQ96NU0 1288 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
SEC22C-215ENST00000487701 CNTNAP3Q9BZ76 1288 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
SEC22C-215ENST00000487701 BCL9O00512 1426 aa8.75□□□□□ -1.01
SEC22C-215ENST00000487701 KRT76Q01546 638 aa8.75□□□□□ -1.01
SEC22C-215ENST00000487701 CNGB1Q14028 1251 aaPredicted RBP8.75□□□□□ -1.01
SEC22C-215ENST00000487701 EIF4A2Q14240 407 aaKnown RBP8.75□□□□□ -1.01
SEC22C-215ENST00000487701 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
SEC22C-215ENST00000487701 FAM196AQ6ZSG2 479 aa8.75□□□□□ -1.01
SEC22C-215ENST00000487701 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
SEC22C-215ENST00000487701 PCDHGA11Q9Y5H2 935 aa8.75□□□□□ -1.01
SEC22C-215ENST00000487701 ATP9BO43861 1147 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 TRIM37O94972 964 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 C4orf17Q53FE4 359 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 DEFB132Q7Z7B7 95 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 RHBDD1Q8TEB9 315 aa8.74□□□□□ -1.01
SEC22C-215ENST00000487701 ZNF837Q96EG3 531 aaPredicted RBP8.74□□□□□ -1.01
SEC22C-215ENST00000487701 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 H7C1W4 665 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 EXOC5O00471 708 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 F11P03951 625 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 MTHFSP49914 203 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 LY75O60449 1722 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 IGSF1Q8N6C5 1336 aa8.73□□□□□ -1.01
SEC22C-215ENST00000487701 SCN11AQ9UI33 1791 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 GPR25O00155 361 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 SMTNP53814 917 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 DBN1Q16643 649 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 RNFT1Q5M7Z0 435 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 FOXR1Q6PIV2 292 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 PLEKHM2Q8IWE5 1019 aa8.72□□□□□ -1.01
SEC22C-215ENST00000487701 IL13P35225 146 aa8.71□□□□□ -1.02
SEC22C-215ENST00000487701 ATP1A2P50993 1020 aa8.71□□□□□ -1.02
SEC22C-215ENST00000487701 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.71□□□□□ -1.02
SEC22C-215ENST00000487701 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
SEC22C-215ENST00000487701 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.02
SEC22C-215ENST00000487701 GMCL1Q96IK5 515 aa8.71□□□□□ -1.02
SEC22C-215ENST00000487701 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
SEC22C-215ENST00000487701 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 TUBGCP6Q96RT7 1819 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 A6NJY4 79 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 BACH1O14867 736 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 KCNQ2O43526 872 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 AEBP1Q8IUX7 1158 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 DDX54Q8TDD1 881 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 TFIP11Q9UBB9 837 aaKnown RBP8.7□□□□□ -1.02
SEC22C-215ENST00000487701 KDRP35968 1356 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 DLG5Q8TDM6 1919 aa8.7□□□□□ -1.02
SEC22C-215ENST00000487701 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 CYP27B1O15528 508 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 PPP2R1AP30153 589 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 BAG6P46379 1132 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 CAMKK2Q96RR4 588 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
SEC22C-215ENST00000487701 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
SEC22C-215ENST00000487701 PLEKHG2Q9H7P9 1386 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 ADAMTS7Q9UKP4 1686 aa8.69□□□□□ -1.02
SEC22C-215ENST00000487701 PALM3A6NDB9 673 aaPredicted RBP8.68□□□□□ -1.02
SEC22C-215ENST00000487701 APBA3O96018 575 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 MSX1P28360 303 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 CLDN10P78369 228 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
SEC22C-215ENST00000487701 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
SEC22C-215ENST00000487701 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 RUBCNLQ9H714 662 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 RBM19Q9Y4C8 960 aaKnown RBP8.68□□□□□ -1.02
SEC22C-215ENST00000487701 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms