RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 CPDO75976 1380 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 KIAA0232Q92628 1395 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 ITSN1Q15811 1721 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 NOS2P35228 1153 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 SEC13P55735 322 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 DPYDQ12882 1025 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 R3HDM1Q15032 1099 aaKnown RBP7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 TEAD4Q15561 434 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 CDCA8Q53HL2 280 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 C1orf216Q8TAB5 229 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 L3MBTL2Q969R5 705 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 GDF2Q9UK05 429 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 RREB1Q92766 1687 aa7.47□□□□□ -1.21
R3HDM1-218ENST00000487294 PHRF1Q9P1Y6 1649 aaKnown RBP7.46□□□□□ -1.21
R3HDM1-218ENST00000487294 TXLNAP40222 546 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 EZH2Q15910 746 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 NGDNQ8NEJ9 315 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 ARXQ96QS3 562 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 HIRIP3Q9BW71 556 aaPredicted RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 ZDHHC3Q9NYG2 299 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 MKL2Q9ULH7 1088 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 THRAP3Q9Y2W1 955 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 LMO7Q8WWI1 1683 aa7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 BRD4O60885 1362 aaPredicted RBP7.46□□□□□ -1.22
R3HDM1-218ENST00000487294 SSH2Q76I76 1423 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 TOPAZ1Q8N9V7 1692 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 ARHGEF28Q8N1W1 1705 aaKnown RBP7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 TRIM37O94972 964 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 NBPF1Q3BBV0 1214 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 FAM182BQ5T319 152 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 NUDT16Q96DE0 195 aaKnown RBP7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 USP19O94966 1318 aa7.45□□□□□ -1.22
R3HDM1-218ENST00000487294 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 NUP188Q5SRE5 1749 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 RGPD3A6NKT7 1758 aaPredicted RBP7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 RGPD4Q7Z3J3 1758 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 C21orf2O43822 256 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 SRPK2P78362 688 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 NRKQ7Z2Y5 1582 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 RAB3GAP2Q9H2M9 1393 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 PARP4Q9UKK3 1724 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 BCL9O00512 1426 aa7.44□□□□□ -1.22
R3HDM1-218ENST00000487294 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 SERTM1A2A2V5 107 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 EML1O00423 815 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 PLSCR1O15162 318 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 LGR5O75473 907 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 APBA3O96018 575 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 TATP17735 454 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 PSMA6P60900 246 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 NBPF8Q3BBV2 869 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 XP32Q5T750 250 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 NLRP8Q86W28 1048 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 TCP11L2Q8N4U5 519 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 C7orf43Q8WVR3 580 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 ZNF232Q9UNY5 417 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 ACEP12821 1306 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 KIAA1210Q9ULL0 1709 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 NINLQ9Y2I6 1382 aa7.43□□□□□ -1.22
R3HDM1-218ENST00000487294 PEAK1Q9H792 1746 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 BNIP3LO60238 219 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 SNRPNP63162 240 aaKnown RBP7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 CHRNA2Q15822 529 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 HINFPQ9BQA5 517 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 CDK19Q9BWU1 502 aa7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 COL5A2P05997 1499 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-218ENST00000487294 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 PIK3R2O00459 728 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 SCG3Q8WXD2 468 aaKnown RBP7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 ABHD17AQ96GS6 310 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 SPON1Q9HCB6 807 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 STRN4Q9NRL3 753 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 SERPINA10Q9UK55 444 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 AATKQ6ZMQ8 1374 aa7.41□□□□□ -1.22
R3HDM1-218ENST00000487294 KRBA1A5PL33 1030 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms