RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 GRAPLQ8TC17 118 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 RBM17Q96I25 401 aaKnown RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 STK32BQ9NY57 414 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 HMG20BQ9P0W2 317 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 RBM8AQ9Y5S9 174 aaKnown RBP8.45□□□□□ -1.06
SF3A3-206ENST00000487062 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
SF3A3-206ENST00000487062 COL4A1P02462 1669 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 PSMA5P28066 241 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 DDR1Q08345 913 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 MAP3K12Q12852 859 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 SCARF1Q14162 830 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 NECTIN1Q15223 517 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 TMC4Q7Z404 712 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 VPS37DQ86XT2 251 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 SPATA5Q8NB90 893 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 APPBP2Q92624 585 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 DSCC1Q9BVC3 393 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 TM6SF1Q9BZW5 370 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 PALD1Q9ULE6 856 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 SNX14Q9Y5W7 946 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 ANKRD31Q8N7Z5 1873 aa8.44□□□□□ -1.06
SF3A3-206ENST00000487062 CCDC88AQ3V6T2 1871 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 SEMA3EO15041 775 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 BBOX1O75936 387 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 BCAMP50895 628 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 KRT32Q14532 448 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 UBE3CQ15386 1083 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 EZH2Q15910 746 aaKnown RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 SLC15A2Q16348 729 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 CRY2Q49AN0 593 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 PRPF40BQ6NWY9 871 aaKnown RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 ZNF589Q86UQ0 364 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 KCNB2Q92953 911 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 CRAMP1Q96RY5 1269 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 SEC62Q99442 399 aaKnown RBP8.43□□□□□ -1.06
SF3A3-206ENST00000487062 BRIP1Q9BX63 1249 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 LEMD3Q9Y2U8 911 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
SF3A3-206ENST00000487062 KLRG2A4D1S0 409 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-206ENST00000487062 SNAP23O00161 211 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 SLC27A2O14975 620 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 FRAT2O75474 233 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-206ENST00000487062 ZMYND10O75800 440 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 IDH1O75874 414 aaKnown RBP8.42□□□□□ -1.06
SF3A3-206ENST00000487062 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-206ENST00000487062 ADD2P35612 726 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 PDE6BP35913 854 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 SLC9C2Q5TAH2 1124 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 CCDC129Q6ZRS4 1044 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 SLKQ9H2G2 1235 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-206ENST00000487062 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 CTNNA3Q9UI47 895 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 CYP46A1Q9Y6A2 500 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 ZNF804BA4D1E1 1349 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 MAST3O60307 1309 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 XDHP47989 1333 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 LRRC37AA6NMS7 1700 aa8.42□□□□□ -1.06
SF3A3-206ENST00000487062 MAST2Q6P0Q8 1798 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 IGSF3O75054 1194 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 MMP10P09238 476 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 NPR1P16066 1061 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 CASTP20810 708 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 ATP2B4P23634 1241 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 ALDH1B1P30837 517 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 HIBADHP31937 336 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 GYG1P46976 350 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 OSBP2Q969R2 916 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 FAM84BQ96KN1 310 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 JAKMIP1Q96N16 626 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
SF3A3-206ENST00000487062 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
SF3A3-206ENST00000487062 CACNA1SQ13698 1873 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 LAMA4Q16363 1823 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 ZNF532Q9HCE3 1301 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 M0R2C6 588 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 HSPD1P10809 573 aaKnown RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 PDE6AP16499 860 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 E2F4Q16254 413 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 VPS53Q5VIR6 699 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 TMED8Q6PL24 325 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 BLOC1S2Q6QNY1 142 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 C15orf52Q6ZUT6 534 aaKnown RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 RUFY3Q7L099 469 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms