RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GJD3Q8N144 294 aa8.32□□□□□ -1.08
GCFC2-209ENST00000486016 OSMRQ99650 979 aa8.32□□□□□ -1.08
GCFC2-209ENST00000486016 CEP41Q9BYV8 373 aa8.32□□□□□ -1.08
GCFC2-209ENST00000486016 CCDC87Q9NVE4 849 aa8.32□□□□□ -1.08
GCFC2-209ENST00000486016 FOXD3Q9UJU5 478 aaPredicted RBP8.32□□□□□ -1.08
GCFC2-209ENST00000486016 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
GCFC2-209ENST00000486016 USP5P45974 858 aa8.31□□□□□ -1.08
GCFC2-209ENST00000486016 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
GCFC2-209ENST00000486016 SNX29Q8TEQ0 813 aa8.31□□□□□ -1.08
GCFC2-209ENST00000486016 BHLHE41Q9C0J9 482 aaPredicted RBP8.31□□□□□ -1.08
GCFC2-209ENST00000486016 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
GCFC2-209ENST00000486016 PHACTR2O75167 634 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 ADAMTS4O75173 837 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 CABP4P57796 275 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 EHHADHQ08426 723 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 STOML1Q9UBI4 398 aa8.3□□□□□ -1.08
GCFC2-209ENST00000486016 EDN3P14138 238 aa8.29□□□□□ -1.08
GCFC2-209ENST00000486016 TTC16Q8NEE8 873 aa8.29□□□□□ -1.08
GCFC2-209ENST00000486016 BSNDQ8WZ55 320 aa8.29□□□□□ -1.08
GCFC2-209ENST00000486016 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
GCFC2-209ENST00000486016 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
GCFC2-209ENST00000486016 MEGF11A6BM72 1044 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 SPINK2P20155 84 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 NLRP12P59046 1061 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 C19orf57Q0VDD7 668 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 ZNF211Q13398 564 aaPredicted RBP8.28□□□□□ -1.08
GCFC2-209ENST00000486016 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
GCFC2-209ENST00000486016 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.28□□□□□ -1.08
GCFC2-209ENST00000486016 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 UTP4Q969X6 686 aaKnown RBP8.28□□□□□ -1.08
GCFC2-209ENST00000486016 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
GCFC2-209ENST00000486016 FAM177BA6PVY3 158 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 GRIK1P39086 918 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 PREPP48147 710 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 FAM20CQ8IXL6 584 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 SLC7A3Q8WY07 619 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 RNF208Q9H0X6 261 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 EGFL7Q9UHF1 273 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 USTQ9Y2C2 406 aa8.27□□□□□ -1.09
GCFC2-209ENST00000486016 HMX2A2RU54 273 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 ICMTO60725 284 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 ABL1P00519 1130 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 NFIAQ12857 509 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 AAMPQ13685 434 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 RNF43Q68DV7 783 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 SOX17Q9H6I2 414 aaPredicted RBP8.26□□□□□ -1.09
GCFC2-209ENST00000486016 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
GCFC2-209ENST00000486016 DLGAP3O95886 979 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 IKBKEQ14164 716 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 RUSC1Q9BVN2 902 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
GCFC2-209ENST00000486016 PRR19A6NJB7 356 aa8.24□□□□□ -1.09
GCFC2-209ENST00000486016 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
GCFC2-209ENST00000486016 NRSN2Q9GZP1 204 aa8.24□□□□□ -1.09
GCFC2-209ENST00000486016 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 METTL12A8MUP2 240 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 TIAF1O95411 115 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
GCFC2-209ENST00000486016 BMP3P12645 472 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 ARL4DP49703 201 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 ARHGAP4P98171 946 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 DTX1Q86Y01 620 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 GALNT12Q8IXK2 581 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 SUGCTQ9HAC7 445 aa8.23□□□□□ -1.09
GCFC2-209ENST00000486016 SERPINB4P48594 390 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 CCNJLQ8IV13 435 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 SMG8Q8ND04 991 aaKnown RBP8.22□□□□□ -1.09
GCFC2-209ENST00000486016 TCF12Q99081 682 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 DBNDD2Q9BQY9 259 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
GCFC2-209ENST00000486016 A0A1W2PP55 124 aa8.21□□□□□ -1.1
GCFC2-209ENST00000486016 WNT11O96014 354 aa8.21□□□□□ -1.1
GCFC2-209ENST00000486016 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
GCFC2-209ENST00000486016 ASAP3Q8TDY4 903 aa8.21□□□□□ -1.1
GCFC2-209ENST00000486016 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
GCFC2-209ENST00000486016 IGHA2P01877 340 aa8.2□□□□□ -1.1
GCFC2-209ENST00000486016 GRIA4P48058 902 aa8.2□□□□□ -1.1
GCFC2-209ENST00000486016 JAG1P78504 1218 aa8.2□□□□□ -1.1
GCFC2-209ENST00000486016 ZNF423Q2M1K9 1284 aa8.2□□□□□ -1.1
GCFC2-209ENST00000486016 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
GCFC2-209ENST00000486016 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
GCFC2-209ENST00000486016 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
GCFC2-209ENST00000486016 ADGRE2Q9UHX3 823 aa8.19□□□□□ -1.1
GCFC2-209ENST00000486016 A0A096LPE4 126 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
GCFC2-209ENST00000486016 USP26Q9BXU7 913 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms