RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 CUX1P39880 1505 aa6.49□□□□□ -1.37
TM9SF3-205ENST00000485093 TTBK1Q5TCY1 1321 aaPredicted RBP6.49□□□□□ -1.37
TM9SF3-205ENST00000485093 GOLGA3Q08378 1498 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 RBM47A0AV96 593 aaKnown RBP6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 PDE2AO00408 941 aaPredicted RBP6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 EIF2AK2P19525 551 aaKnown RBP6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 GRIA4P48058 902 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 GRM2Q14416 872 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 CEP162Q5TB80 1403 aa6.48□□□□□ -1.37
TM9SF3-205ENST00000485093 GIPC1O14908 333 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 PRPF40AO75400 957 aaKnown RBP6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 CEP135Q66GS9 1140 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 DTWD1Q8N5C7 304 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 C3orf58Q8NDZ4 430 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 FRMD6Q96NE9 622 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 NESP48681 1621 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 BIVM-ERCC5R4GMW8 1640 aa6.47□□□□□ -1.37
TM9SF3-205ENST00000485093 SMNDC1O75940 238 aaKnown RBP eCLIP6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 LDHBP07195 334 aaKnown RBP6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 DAB2P98082 770 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 EAPPQ56P03 285 aaPredicted RBP6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 LDLRAD1Q5T700 205 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 PLVAPQ9BX97 442 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 FANCD2Q9BXW9 1451 aa6.46□□□□□ -1.38
TM9SF3-205ENST00000485093 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 AMPD1P23109 780 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 MAPK8P45983 427 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 ALYREFQ86V81 257 aaKnown RBP6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 FBXO11Q86XK2 927 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 IL22RA1Q8N6P7 574 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 BSNDQ8WZ55 320 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 BCO2Q9BYV7 579 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 SRCIN1Q9C0H9 1055 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 LIN7BQ9HAP6 207 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
TM9SF3-205ENST00000485093 KIF27Q86VH2 1401 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 A0A096LPE4 126 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 A0A1W2PPZ6 126 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 METTL12A8MUP2 240 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 DLL1O00548 723 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 EPHA1P21709 976 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 GNA15P30679 374 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 FGD1P98174 961 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 ZNF423Q2M1K9 1284 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 SPRED3Q2MJR0 410 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 RPS26P11Q5JNZ5 115 aaPredicted RBP6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 WNT8BQ93098 351 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 MUC3BQ9H195 1237 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 SRA1Q9HD15 236 aaKnown RBP6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 SH2B1Q9NRF2 756 aaPredicted RBP6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 RAPGEF2Q9Y4G8 1499 aa6.44□□□□□ -1.38
TM9SF3-205ENST00000485093 PIK3R2O00459 728 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 SOX1O00570 391 aaPredicted RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 ZNF16P17020 682 aaPredicted RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 PTPRAP18433 802 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 CDC27P30260 824 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 NXPE4Q6UWF7 544 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 FMR1NBQ8N0W7 255 aaPredicted RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 DUSP9Q99956 384 aaKnown RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 PPME1Q9Y570 386 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 KIF21BO75037 1637 aa6.43□□□□□ -1.38
TM9SF3-205ENST00000485093 CLIP1P30622 1438 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 CUX2O14529 1486 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 CTSHP09668 335 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 ESRRAP11474 423 aaPredicted RBP6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 XRCC5P13010 732 aaKnown RBP6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 GDF6Q6KF10 455 aaPredicted RBP6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 MAP4K3Q8IVH8 894 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 EHD4Q9H223 541 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 ZNF576Q9H609 170 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 TRAK1Q9UPV9 953 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 PRDM2Q13029 1718 aa6.42□□□□□ -1.38
TM9SF3-205ENST00000485093 FGD5Q6ZNL6 1462 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 KRBA1A5PL33 1030 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 SELPP16109 830 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 FAAP100Q0VG06 881 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 HGSNATQ68CP4 663 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
TM9SF3-205ENST00000485093 OSGEPQ9NPF4 335 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms