RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 JAG2Q9Y219 1238 aa18.17■□□□□ 0.5
PCDH17-202ENST00000484979 IFI16Q16666 785 aaKnown RBP18.16■□□□□ 0.5
PCDH17-202ENST00000484979 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 CCDC97Q96F63 343 aaPredicted RBP18.16■□□□□ 0.5
PCDH17-202ENST00000484979 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 NEO1Q92859 1461 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 CHMLP26374 656 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 UVSSAQ2YD98 709 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
PCDH17-202ENST00000484979 CASQ1P31415 396 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 TBC1D5Q92609 795 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 APPBP2Q92624 585 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 EIF6P56537 245 aaKnown RBP18.15■□□□□ 0.5
PCDH17-202ENST00000484979 LPIN2Q92539 896 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 NAP1L4Q99733 375 aaKnown RBP18.15■□□□□ 0.5
PCDH17-202ENST00000484979 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
PCDH17-202ENST00000484979 ZBTB7BO15156 539 aaPredicted RBP18.15■□□□□ 0.5
PCDH17-202ENST00000484979 MARCKSP29966 332 aaPredicted RBP18.15■□□□□ 0.5
PCDH17-202ENST00000484979 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 FLAD1Q8NFF5 587 aa18.15■□□□□ 0.5
PCDH17-202ENST00000484979 COL17A1Q9UMD9 1497 aaPredicted RBP18.14■□□□□ 0.5
PCDH17-202ENST00000484979 TNNI3KQ59H18 835 aa18.14■□□□□ 0.5
PCDH17-202ENST00000484979 DBNDD2Q9BQY9 259 aa18.14■□□□□ 0.5
PCDH17-202ENST00000484979 FPGT-TNNI3KV9GXZ4 949 aa18.14■□□□□ 0.5
PCDH17-202ENST00000484979 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
PCDH17-202ENST00000484979 SPECC1Q5M775 1068 aa18.14■□□□□ 0.49
PCDH17-202ENST00000484979 EHBP1Q8NDI1 1231 aa18.14■□□□□ 0.49
PCDH17-202ENST00000484979 SNX21Q969T3 373 aa18.14■□□□□ 0.49
PCDH17-202ENST00000484979 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
PCDH17-202ENST00000484979 APBA3O96018 575 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 LTKP29376 864 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 KRT2P35908 639 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 F13A1P00488 732 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 GCKRQ14397 625 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 DTHD1Q6ZMT9 781 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 CCDC91Q7Z6B0 441 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 TBC1D22AQ8WUA7 517 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 DYDC1Q8WWB3 177 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 UBASH3AP57075 661 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 APOBRQ0VD83 1088 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCDH17-202ENST00000484979 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 UQCRHLA0A096LP55 91 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 BACH1O14867 736 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 UQCRHP07919 91 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 TNNT1P13805 278 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 IFFO1Q0D2I5 559 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 PRPF4BQ13523 1007 aaKnown RBP18.13■□□□□ 0.49
PCDH17-202ENST00000484979 GLT8D2Q9H1C3 349 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 ARHGEF10LQ9HCE6 1279 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
PCDH17-202ENST00000484979 CYLC1P35663 651 aaPredicted RBP18.12■□□□□ 0.49
PCDH17-202ENST00000484979 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 PTPDC1A2A3K4 754 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 XAGE2Q96GT9 111 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 SYNCQ9H7C4 482 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 TRMT1Q9NXH9 659 aaKnown RBP18.12■□□□□ 0.49
PCDH17-202ENST00000484979 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 AK2P54819 239 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
PCDH17-202ENST00000484979 INTS4Q96HW7 963 aaKnown RBP18.12■□□□□ 0.49
PCDH17-202ENST00000484979 HLTFQ14527 1009 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDH17-202ENST00000484979 FAM13AO94988 1023 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 ADCY5O95622 1261 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 RPS8P62241 208 aaKnown RBP18.11■□□□□ 0.49
PCDH17-202ENST00000484979 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
PCDH17-202ENST00000484979 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 DHX58Q96C10 678 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 MMRN2Q9H8L6 949 aa18.11■□□□□ 0.49
PCDH17-202ENST00000484979 KIF4AO95239 1232 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 FAM200AQ8TCP9 573 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
PCDH17-202ENST00000484979 RUFY3Q7L099 469 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 KBTBD3Q8NAB2 608 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 TMOD4Q9NZQ9 345 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 DNM1Q05193 864 aaKnown RBP18.1■□□□□ 0.49
PCDH17-202ENST00000484979 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
PCDH17-202ENST00000484979 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
PCDH17-202ENST00000484979 DDX17Q92841 729 aaKnown RBP18.09■□□□□ 0.49
PCDH17-202ENST00000484979 PZPP20742 1482 aa18.09■□□□□ 0.49
PCDH17-202ENST00000484979 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
PCDH17-202ENST00000484979 IVNS1ABPQ9Y6Y0 642 aa18.09■□□□□ 0.49
PCDH17-202ENST00000484979 MROH5Q6ZUA9 1318 aa18.08■□□□□ 0.49
PCDH17-202ENST00000484979 BICDL2A1A5D9 508 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 GCOM1H8Y6P7 765 aaPredicted RBP18.08■□□□□ 0.48
PCDH17-202ENST00000484979 GPAA1O43292 621 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 MYZAPP0CAP1 466 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 ADGRL2O95490 1459 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 ERBB4Q15303 1308 aa18.08■□□□□ 0.48
PCDH17-202ENST00000484979 PPP2R5BQ15173 497 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms