RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 TAF1P21675 1872 aa11.19□□□□□ -0.62
DDX39B-221ENST00000484566 H0YGN5 161 aa11.19□□□□□ -0.62
DDX39B-221ENST00000484566 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
DDX39B-221ENST00000484566 CSRNP1Q96S65 589 aa11.19□□□□□ -0.62
DDX39B-221ENST00000484566 EYA3Q99504 573 aa11.19□□□□□ -0.62
DDX39B-221ENST00000484566 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
DDX39B-221ENST00000484566 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
DDX39B-221ENST00000484566 EGFRP00533 1210 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
DDX39B-221ENST00000484566 PSEN2P49810 448 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.629e-11■□□□□ 9.9
DDX39B-221ENST00000484566 C6orf132Q5T0Z8 1188 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
DDX39B-221ENST00000484566 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
DDX39B-221ENST00000484566 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
DDX39B-221ENST00000484566 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 ECE2O60344 883 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 EIF2S2P20042 333 aaKnown RBP11.17□□□□□ -0.62
DDX39B-221ENST00000484566 OSBPP22059 807 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 PPP2R1AP30153 589 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 FKBP1BP68106 108 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
DDX39B-221ENST00000484566 NLRP10Q86W26 655 aa11.17□□□□□ -0.62
DDX39B-221ENST00000484566 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-221ENST00000484566 PLA2G5P39877 138 aa11.16□□□□□ -0.62
DDX39B-221ENST00000484566 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
DDX39B-221ENST00000484566 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-221ENST00000484566 ZNF296Q8WUU4 475 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-221ENST00000484566 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
DDX39B-221ENST00000484566 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
DDX39B-221ENST00000484566 MAPK8IP3Q9UPT6 1336 aa11.15□□□□□ -0.62
DDX39B-221ENST00000484566 ANXA1P04083 346 aa11.15□□□□□ -0.62
DDX39B-221ENST00000484566 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-221ENST00000484566 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
DDX39B-221ENST00000484566 NFE2L2Q16236 605 aa11.15□□□□□ -0.62
DDX39B-221ENST00000484566 LRP10Q7Z4F1 713 aa11.15□□□□□ -0.62
DDX39B-221ENST00000484566 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
DDX39B-221ENST00000484566 TK2O00142 265 aa11.14□□□□□ -0.63
DDX39B-221ENST00000484566 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
DDX39B-221ENST00000484566 PROSER3Q2NL68 480 aa11.14□□□□□ -0.63
DDX39B-221ENST00000484566 ANGEL2Q5VTE6 544 aaKnown RBP11.14□□□□□ -0.63
DDX39B-221ENST00000484566 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
DDX39B-221ENST00000484566 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
DDX39B-221ENST00000484566 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
DDX39B-221ENST00000484566 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-221ENST00000484566 ZNF609O15014 1411 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 TBC1D8O95759 1140 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
DDX39B-221ENST00000484566 GPSM2P81274 684 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
DDX39B-221ENST00000484566 PNNQ9H307 717 aaKnown RBP11.13□□□□□ -0.63
DDX39B-221ENST00000484566 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 PSME4Q14997 1843 aa11.13□□□□□ -0.63
DDX39B-221ENST00000484566 SREBF2Q12772 1141 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 SCARF1Q14162 830 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 TTLL12Q14166 644 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-221ENST00000484566 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
DDX39B-221ENST00000484566 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 AGBL3Q8NEM8 1001 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
DDX39B-221ENST00000484566 MUC3AQ02505 3323 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 GPR25O00155 361 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 UFL1O94874 794 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 NF2P35240 595 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 ZNF280AP59817 542 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-221ENST00000484566 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
DDX39B-221ENST00000484566 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-221ENST00000484566 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX39B-221ENST00000484566 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 PLEKHF1Q96S99 279 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 ANKIB1Q9P2G1 1089 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 RAPGEFL1Q9UHV5 662 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
DDX39B-221ENST00000484566 SOX1O00570 391 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-221ENST00000484566 FKTNO75072 461 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
DDX39B-221ENST00000484566 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 FAM89AQ96GI7 184 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
DDX39B-221ENST00000484566 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
DDX39B-221ENST00000484566 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
DDX39B-221ENST00000484566 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
DDX39B-221ENST00000484566 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
DDX39B-221ENST00000484566 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
DDX39B-221ENST00000484566 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
DDX39B-221ENST00000484566 COL4A1P02462 1669 aa11.08□□□□□ -0.64
DDX39B-221ENST00000484566 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-221ENST00000484566 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms