RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 OXER1Q8TDS5 423 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 DHRS1Q96LJ7 313 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 UROC1Q96N76 676 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 GMLQ99445 158 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 SLC39A3Q9BRY0 314 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 SRRTQ9BXP5 876 aaKnown RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 PTPRHQ9HD43 1115 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 PCF11O94913 1555 aaKnown RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 MYO1BO43795 1136 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 XRCC5P13010 732 aaKnown RBP9.49□□□□□ -0.89
CAST-210ENST00000484552 NCAM1P13591 858 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 RIPK4P57078 832 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
CAST-210ENST00000484552 WDR45BQ5MNZ6 344 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 HYIQ5T013 277 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 PGBD4Q96DM1 585 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
CAST-210ENST00000484552 ATP8A1Q9Y2Q0 1164 aa9.49□□□□□ -0.89
CAST-210ENST00000484552 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 FOXN3O00409 490 aaPredicted RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 TNNT1P13805 278 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 MYLK4Q86YV6 388 aaPredicted RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 TEX9Q8N6V9 391 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 SH3KBP1Q96B97 665 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 RSRC1Q96IZ7 334 aaKnown RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 SH3GLB2Q9NR46 395 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 ZNHIT6Q9NWK9 470 aaKnown RBP9.48□□□□□ -0.89
CAST-210ENST00000484552 NEO1Q92859 1461 aa9.48□□□□□ -0.89
CAST-210ENST00000484552 SMTNL1A8MU46 457 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 POTEIP0CG38 1075 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 MYBL2P10244 700 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 DNAJA1P31689 397 aaKnown RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 UBASH3AP57075 661 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 BPIFB3P59826 476 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 C16orf54Q6UWD8 224 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 METTL16Q86W50 562 aaKnown RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 LRRC49Q8IUZ0 686 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 PPHLN1Q8NEY8 458 aaKnown RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 GPR101Q96P66 508 aaPredicted RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 TCHPQ9BT92 498 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 SLC7A5P2Q9GIP4 190 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 TMEM98Q9Y2Y6 226 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 ZNF24P17028 368 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 GJA8P48165 433 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 IRGCQ6NXR0 463 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 GIMAP8Q8ND71 665 aaPredicted RBP9.47□□□□□ -0.89
CAST-210ENST00000484552 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 AKNAQ7Z591 1439 aa9.47□□□□□ -0.89
CAST-210ENST00000484552 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 MLLT3P42568 568 aaPredicted RBP9.46□□□□□ -0.9
CAST-210ENST00000484552 COPAP53621 1224 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 RWDD2BP57060 319 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 NUCB1Q02818 461 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 UNC5DQ6UXZ4 953 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 PACS1Q6VY07 963 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 RASGRP2Q7LDG7 609 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.9
CAST-210ENST00000484552 ARL10Q8N8L6 244 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 MAML1Q92585 1016 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 SKA1Q96BD8 255 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
CAST-210ENST00000484552 PRKRIP1Q9H875 184 aaPredicted RBP9.46□□□□□ -0.9
CAST-210ENST00000484552 FAM170AA1A519 330 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 hCG_1984214I3L0E3 225 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 AKR1B10O60218 316 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 CBLBQ13191 982 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 LDLRAD1Q5T700 205 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 KIAA1211Q6ZU35 1233 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 ADAMTS19Q8TE59 1207 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 BICD1Q96G01 975 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 NELL2Q99435 816 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 MORC2Q9Y6X9 1032 aaPredicted RBP9.45□□□□□ -0.9
CAST-210ENST00000484552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
CAST-210ENST00000484552 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
CAST-210ENST00000484552 PRPHP41219 470 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 GABPB1Q06547 395 aaPredicted RBP9.45□□□□□ -0.9
CAST-210ENST00000484552 PDIA5Q14554 519 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 CFAP161Q6P656 301 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 RASSF3Q86WH2 238 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 NKAIN3Q8N8D7 197 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 RTF1Q92541 710 aaKnown RBP9.45□□□□□ -0.9
CAST-210ENST00000484552 USP6NLQ92738 828 aa9.45□□□□□ -0.9
CAST-210ENST00000484552 YIPF2Q9BWQ6 316 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms