RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 RNF113AO15541 343 aaKnown RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 HELBQ8NG08 1087 aaPredicted RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDR1-244ENST00000482873 V9GYY5 206 aaPredicted RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 CPDO75976 1380 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 GABPB1Q06547 395 aaPredicted RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 IQCB1Q15051 598 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 ZNF215Q9UL58 517 aaPredicted RBP17.81■□□□□ 0.44
DDR1-244ENST00000482873 JCADQ9P266 1359 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 MRC1P22897 1456 aa17.81■□□□□ 0.44
DDR1-244ENST00000482873 KMT5BQ4FZB7 885 aa17.8■□□□□ 0.44
DDR1-244ENST00000482873 C11orf57Q6ZUT1 292 aaPredicted RBP17.8■□□□□ 0.44
DDR1-244ENST00000482873 PUS7LQ9H0K6 701 aaKnown RBP17.8■□□□□ 0.44
DDR1-244ENST00000482873 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
DDR1-244ENST00000482873 NSUN7Q8NE18 718 aaKnown RBP17.8■□□□□ 0.44
DDR1-244ENST00000482873 CARD10Q9BWT7 1032 aa17.8■□□□□ 0.44
DDR1-244ENST00000482873 CDC25BP30305 580 aa17.79■□□□□ 0.44
DDR1-244ENST00000482873 RESTQ13127 1097 aa17.79■□□□□ 0.44
DDR1-244ENST00000482873 CCDC158Q5M9N0 1113 aa17.79■□□□□ 0.44
DDR1-244ENST00000482873 GREM2Q9H772 168 aa17.79■□□□□ 0.44
DDR1-244ENST00000482873 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
DDR1-244ENST00000482873 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
DDR1-244ENST00000482873 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
DDR1-244ENST00000482873 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
DDR1-244ENST00000482873 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 NYAP1Q6ZVC0 841 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 GOLGA6L19H0YKK7 550 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 METTL24Q5JXM2 366 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
DDR1-244ENST00000482873 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 SKILP12757 684 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 SARM1Q6SZW1 724 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 GLI3P10071 1580 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 RXRAP19793 462 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 MRFAP1L1Q96HT8 127 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.44
DDR1-244ENST00000482873 TRMT1Q9NXH9 659 aaKnown RBP17.77■□□□□ 0.44
DDR1-244ENST00000482873 FOXP2O15409 715 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 FGAP02671 866 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 ITGA6P23229 1130 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
DDR1-244ENST00000482873 TERF2Q15554 542 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 FILIP1Q7Z7B0 1213 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 ALDH8A1Q9H2A2 487 aaPredicted RBP17.76■□□□□ 0.43
DDR1-244ENST00000482873 PFKFB2O60825 505 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 CAVIN2O95810 425 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 ZNF397Q8NF99 534 aaPredicted RBP17.76■□□□□ 0.43
DDR1-244ENST00000482873 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 CNNM1Q9NRU3 951 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 ZBTB1Q9Y2K1 713 aa17.76■□□□□ 0.43
DDR1-244ENST00000482873 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 CCZ1BP86790 482 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 CCZ1P86791 482 aaPredicted RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 EXOSC10Q01780 885 aaKnown RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 FBXO38Q6PIJ6 1188 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 KRT222Q8N1A0 295 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 USP28Q96RU2 1077 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 SOS2Q07890 1332 aaPredicted RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 KCPQ6ZWJ8 1503 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 IDH1O75874 414 aaKnown RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 ELF2Q15723 593 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 DCCP43146 1447 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 APPP05067 770 aa17.75■□□□□ 0.43
DDR1-244ENST00000482873 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
DDR1-244ENST00000482873 MCAMP43121 646 aa17.74■□□□□ 0.43
DDR1-244ENST00000482873 NEMFO60524 1076 aa17.74■□□□□ 0.43
DDR1-244ENST00000482873 TAF3Q5VWG9 929 aa17.74■□□□□ 0.43
DDR1-244ENST00000482873 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 SMARCC2Q8TAQ2 1214 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 GOLPH3LQ9H4A5 285 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 STARD3NLO95772 234 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 FDPSP14324 419 aaKnown RBP17.73■□□□□ 0.43
DDR1-244ENST00000482873 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
DDR1-244ENST00000482873 STX1AQ16623 288 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 DHX40Q8IX18 779 aaKnown RBP17.73■□□□□ 0.43
DDR1-244ENST00000482873 CCAR2Q8N163 923 aaKnown RBP17.73■□□□□ 0.43
DDR1-244ENST00000482873 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
DDR1-244ENST00000482873 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 FAM53CQ9NYF3 392 aa17.73■□□□□ 0.43
DDR1-244ENST00000482873 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
DDR1-244ENST00000482873 BECN2A8MW95 431 aa17.72■□□□□ 0.43
DDR1-244ENST00000482873 GPAA1O43292 621 aa17.72■□□□□ 0.43
DDR1-244ENST00000482873 CIAO1O76071 339 aa17.72■□□□□ 0.43
DDR1-244ENST00000482873 ME1P48163 572 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms