RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 PLEKHO1Q53GL0 409 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-203ENST00000480484 CCDC171Q6TFL3 1326 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 QSER1Q2KHR3 1735 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 CCDC69A6NI79 296 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 SLU7O95391 586 aaKnown RBP11.82□□□□□ -0.52
COMMD4-203ENST00000480484 CAPN2P17655 700 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 ERCC6LQ2NKX8 1250 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
COMMD4-203ENST00000480484 CCDC129Q6ZRS4 1044 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
COMMD4-203ENST00000480484 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 N4BP2Q86UW6 1770 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 BECN2A8MW95 431 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 ZNF446Q9NWS9 450 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 C1orf167Q5SNV9 1468 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 SH3BP5O60239 455 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 PDE6BP35913 854 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 CLSTN2Q9H4D0 955 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-203ENST00000480484 RGPD5Q99666 1765 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 VRTNQ9H8Y1 702 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
COMMD4-203ENST00000480484 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-203ENST00000480484 BOLA2Q9H3K6 86 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 RECKO95980 971 aa11.8□□□□□ -0.52
COMMD4-203ENST00000480484 AIMP1Q12904 312 aaKnown RBP11.8□□□□□ -0.52
COMMD4-203ENST00000480484 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
COMMD4-203ENST00000480484 LEO1Q8WVC0 666 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-203ENST00000480484 NPHP3Q7Z494 1330 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-203ENST00000480484 ZKSCAN1P17029 563 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-203ENST00000480484 LONRF3Q496Y0 759 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 FAM193AP78312 1265 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 NMIQ13287 307 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-203ENST00000480484 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-203ENST00000480484 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 ADAMTS19Q8TE59 1207 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 SPACA7Q96KW9 195 aa11.79□□□□□ -0.52
COMMD4-203ENST00000480484 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
COMMD4-203ENST00000480484 PDCP20941 246 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 AMHR2Q16671 573 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 CCAR2Q8N163 923 aaKnown RBP11.78□□□□□ -0.52
COMMD4-203ENST00000480484 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 MTA3Q9BTC8 594 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
COMMD4-203ENST00000480484 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 FECHP22830 423 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
COMMD4-203ENST00000480484 SYT10Q6XYQ8 523 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
COMMD4-203ENST00000480484 ELP1O95163 1332 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 AOX1Q06278 1338 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 TNNT3P45378 269 aaPredicted RBP11.77□□□□□ -0.52
COMMD4-203ENST00000480484 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.52
COMMD4-203ENST00000480484 COL15A1P39059 1388 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 NEMFO60524 1076 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 CYP2C19P33261 490 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 AACSQ86V21 672 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 EAF2Q96CJ1 260 aaPredicted RBP11.77□□□□□ -0.53
COMMD4-203ENST00000480484 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 DBF4Q9UBU7 674 aaPredicted RBP11.77□□□□□ -0.53
COMMD4-203ENST00000480484 G3BP2Q9UN86 482 aaKnown RBP11.77□□□□□ -0.53
COMMD4-203ENST00000480484 HOXB7P09629 217 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 CLCN6P51797 869 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 NCAPD2Q15021 1401 aa11.77□□□□□ -0.53
COMMD4-203ENST00000480484 ERBB3P21860 1342 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms