RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 PLCB3Q01970 1234 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 ORC1Q13415 861 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 RSPO4Q2I0M5 234 aaPredicted RBP4.51□□□□□ -1.69
GARNL3-214ENST00000478696 NKAPLQ5M9Q1 402 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 KIAA0319Q5VV43 1072 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 PEAR1Q5VY43 1037 aaPredicted RBP4.51□□□□□ -1.69
GARNL3-214ENST00000478696 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.51□□□□□ -1.69
GARNL3-214ENST00000478696 ALKBH8Q96BT7 664 aaKnown RBP4.51□□□□□ -1.69
GARNL3-214ENST00000478696 KLHDC7BQ96G42 594 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 HHIPQ96QV1 700 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 CSRNP1Q96S65 589 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 RNF208Q9H0X6 261 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 LATS2Q9NRM7 1088 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 TRAK1Q9UPV9 953 aa4.51□□□□□ -1.69
GARNL3-214ENST00000478696 A0A096LPE4 126 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 A0A1W2PP55 124 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 A0A1W2PPZ6 126 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 SOX1O00570 391 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 GPR182O15218 404 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 DHX15O43143 795 aaKnown RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 HNRNPUQ00839 825 aaKnown RBP eCLIP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 GSTM4Q03013 218 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 FOXD4L6Q3SYB3 417 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 HP1BP3Q5SSJ5 553 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 FDX2Q6P4F2 183 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 FOXD4L3Q6VB84 417 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 TMC7Q7Z402 723 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 CCNJLQ8IV13 435 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 DZIP1LQ8IYY4 767 aaKnown RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 AGGF1Q8N302 714 aaeCLIP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 CCDC74AQ96AQ1 378 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 MEGF10Q96KG7 1140 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 CLEC4MQ9H2X3 399 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 SOX17Q9H6I2 414 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-214ENST00000478696 NPHS2Q9NP85 383 aa4.5□□□□□ -1.69
GARNL3-214ENST00000478696 CYP11A1P05108 521 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 ESRRAP11474 423 aaPredicted RBP4.49□□□□□ -1.69
GARNL3-214ENST00000478696 UVSSAQ2YD98 709 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 NUTM2GQ5VZR2 741 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 USPL1Q5W0Q7 1092 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 ANKRD34AQ69YU3 496 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 ADAMTSL4Q6UY14 1074 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 VN1R5Q7Z5H4 357 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 SLC51AQ86UW1 340 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 UTP4Q969X6 686 aaKnown RBP4.49□□□□□ -1.69
GARNL3-214ENST00000478696 RUSC1Q9BVN2 902 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 SSBP4Q9BWG4 385 aaPredicted RBP4.49□□□□□ -1.69
GARNL3-214ENST00000478696 USP26Q9BXU7 913 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 CYP4F12Q9HCS2 524 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 KCNK4Q9NYG8 393 aa4.49□□□□□ -1.69
GARNL3-214ENST00000478696 METTL12A8MUP2 240 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 GSC2O15499 205 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 DDX3YO15523 660 aaKnown RBP4.48□□□□□ -1.69
GARNL3-214ENST00000478696 GAS2O43903 313 aaKnown RBP4.48□□□□□ -1.69
GARNL3-214ENST00000478696 WISP1O95388 367 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 ATP2B2Q01814 1243 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 PCDH1Q08174 1060 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 PRSS36Q5K4E3 855 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 PRR23CQ6ZRP0 262 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 AEBP1Q8IUX7 1158 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 UBASH3BQ8TF42 649 aa4.48□□□□□ -1.69
GARNL3-214ENST00000478696 FOXD4L4Q8WXT5 416 aaPredicted RBP4.48□□□□□ -1.69
GARNL3-214ENST00000478696 MEGF11A6BM72 1044 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 ADAM11O75078 769 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 MAPK8P45983 427 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 GRIA4P48058 902 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 PTPN12Q05209 780 aaKnown RBP4.47□□□□□ -1.69
GARNL3-214ENST00000478696 EXOSC6Q5RKV6 272 aaKnown RBP4.47□□□□□ -1.69
GARNL3-214ENST00000478696 ZMYM1Q5SVZ6 1142 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 DTHD1Q6ZMT9 781 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 Q6ZS46 218 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 KIAA1211Q6ZU35 1233 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 C12orf50Q8NA57 414 aaPredicted RBP4.47□□□□□ -1.69
GARNL3-214ENST00000478696 TCF12Q99081 682 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 CORO1BQ9BR76 489 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 STOML1Q9UBI4 398 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 RAXQ9Y2V3 346 aa4.47□□□□□ -1.69
GARNL3-214ENST00000478696 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 SCO2A0A1W2PP80 73 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 TREHO43280 583 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 XRCC5P13010 732 aaKnown RBP4.46□□□□□ -1.7
GARNL3-214ENST00000478696 ITPKAP23677 461 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 FGD1P98174 961 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 PPP2R3AQ06190 1150 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 SPRED3Q2MJR0 410 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 EPS8L3Q8TE67 593 aaKnown RBP4.46□□□□□ -1.7
GARNL3-214ENST00000478696 ASB16Q96NS5 453 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 UBL7Q96S82 380 aaPredicted RBP4.46□□□□□ -1.7
GARNL3-214ENST00000478696 YIPF2Q9BWQ6 316 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 KCNF1Q9H3M0 494 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 RAD18Q9NS91 495 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
GARNL3-214ENST00000478696 LOC100289279A0A1B0GTE1 492 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 TMEM238LA0A1B0GVL6 79 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 TM4SF5O14894 197 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 B3GALT4O96024 378 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 IGHA2P01877 340 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 RXRBP28702 533 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 USP11P51784 963 aa4.45□□□□□ -1.7
GARNL3-214ENST00000478696 AP3B2Q13367 1082 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms