RNA–Protein interactions for RNA: ENST00000478695.1

DDX1-206, Transcript of DEAD-box helicase 1, humanhuman

TSL 4

Gene DDX1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-206ENST00000478695 ZKSCAN3Q9BRR0 538 aa8.66□□□□□ -1.02
DDX1-206ENST00000478695 RNF208Q9H0X6 261 aa8.66□□□□□ -1.02
DDX1-206ENST00000478695 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
DDX1-206ENST00000478695 WISP1O95388 367 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 NLRP12P59046 1061 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 NXPE3Q969Y0 559 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 KCNK4Q9NYG8 393 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 SOX13Q9UN79 622 aa8.65□□□□□ -1.02
DDX1-206ENST00000478695 NFKBIEO00221 500 aa8.64□□□□□ -1.03
DDX1-206ENST00000478695 TRPA1O75762 1119 aa8.64□□□□□ -1.03
DDX1-206ENST00000478695 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
DDX1-206ENST00000478695 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
DDX1-206ENST00000478695 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
DDX1-206ENST00000478695 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
DDX1-206ENST00000478695 KIAA1211Q6ZU35 1233 aa8.63□□□□□ -1.03
DDX1-206ENST00000478695 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
DDX1-206ENST00000478695 FOXD4L4Q8WXT5 416 aaPredicted RBP8.63□□□□□ -1.03
DDX1-206ENST00000478695 HHIPQ96QV1 700 aa8.63□□□□□ -1.03
DDX1-206ENST00000478695 ZFYVE28Q9HCC9 887 aa8.63□□□□□ -1.03
DDX1-206ENST00000478695 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 DDX3YO15523 660 aaKnown RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 SERPINB4P48594 390 aa8.62□□□□□ -1.03
DDX1-206ENST00000478695 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
DDX1-206ENST00000478695 UBL7Q96S82 380 aaPredicted RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
DDX1-206ENST00000478695 BHLHE41Q9C0J9 482 aaPredicted RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
DDX1-206ENST00000478695 ADAM11O75078 769 aa8.61□□□□□ -1.03
DDX1-206ENST00000478695 NUTM2GQ5VZR2 741 aa8.61□□□□□ -1.03
DDX1-206ENST00000478695 ADAMTSL4Q6UY14 1074 aa8.61□□□□□ -1.03
DDX1-206ENST00000478695 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
DDX1-206ENST00000478695 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
DDX1-206ENST00000478695 IGLV1-40P01703 118 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 HP1BP3Q5SSJ5 553 aaPredicted RBP8.6□□□□□ -1.03
DDX1-206ENST00000478695 FAM46AQ96IP4 442 aaKnown RBP8.6□□□□□ -1.03
DDX1-206ENST00000478695 MYRFLQ96LU7 910 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 KCNF1Q9H3M0 494 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 CYP4F12Q9HCS2 524 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 PCMTD2Q9NV79 361 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 HIF3AQ9Y2N7 669 aa8.6□□□□□ -1.03
DDX1-206ENST00000478695 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
DDX1-206ENST00000478695 LIN7BQ9HAP6 207 aa8.59□□□□□ -1.03
DDX1-206ENST00000478695 SOX1O00570 391 aaPredicted RBP8.58□□□□□ -1.04
DDX1-206ENST00000478695 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
DDX1-206ENST00000478695 GSTM4Q03013 218 aa8.58□□□□□ -1.04
DDX1-206ENST00000478695 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
DDX1-206ENST00000478695 GALNT12Q8IXK2 581 aa8.58□□□□□ -1.04
DDX1-206ENST00000478695 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
DDX1-206ENST00000478695 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
DDX1-206ENST00000478695 MEGF11A6BM72 1044 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 TM4SF5O14894 197 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 HYAL3O43820 417 aaPredicted RBP8.57□□□□□ -1.04
DDX1-206ENST00000478695 CPNE3O75131 537 aaKnown RBP8.57□□□□□ -1.04
DDX1-206ENST00000478695 BMP3P12645 472 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 GRIK1P39086 918 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.57□□□□□ -1.04
DDX1-206ENST00000478695 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 FAM20CQ8IXL6 584 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 ARMC10Q8N2F6 343 aa8.57□□□□□ -1.04
DDX1-206ENST00000478695 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
DDX1-206ENST00000478695 ESRRAP11474 423 aaPredicted RBP8.56□□□□□ -1.04
DDX1-206ENST00000478695 RXRBP28702 533 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 PREPP48147 710 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 NFIAQ12857 509 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
DDX1-206ENST00000478695 BEND4Q6ZU67 534 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 CLEC4MQ9H2X3 399 aaPredicted RBP8.56□□□□□ -1.04
DDX1-206ENST00000478695 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
DDX1-206ENST00000478695 A0A096LPE4 126 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 A0A1W2PP55 124 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 A0A1W2PPZ6 126 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 CYP11A1P05108 521 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 HNRNPUQ00839 825 aaKnown RBP eCLIP8.55□□□□□ -1.04
DDX1-206ENST00000478695 PCDH1Q08174 1060 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 EHD4Q9H223 541 aa8.55□□□□□ -1.04
DDX1-206ENST00000478695 COBLO75128 1261 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 SSTR4P31391 388 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 USP11P51784 963 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 DMRTB1Q96MA1 342 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
DDX1-206ENST00000478695 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
DDX1-206ENST00000478695 EXOSC6Q5RKV6 272 aaKnown RBP8.53□□□□□ -1.04
DDX1-206ENST00000478695 INTS5Q6P9B9 1019 aaKnown RBP8.53□□□□□ -1.04
DDX1-206ENST00000478695 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
DDX1-206ENST00000478695 SMG8Q8ND04 991 aaKnown RBP8.53□□□□□ -1.04
DDX1-206ENST00000478695 SUGCTQ9HAC7 445 aa8.53□□□□□ -1.04
DDX1-206ENST00000478695 HMX2A2RU54 273 aa8.52□□□□□ -1.05
DDX1-206ENST00000478695 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
DDX1-206ENST00000478695 GADD45BO75293 160 aaPredicted RBP8.52□□□□□ -1.05
DDX1-206ENST00000478695 KIAA0319Q5VV43 1072 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms