RNA–Protein interactions for RNA: ENST00000478695.1

DDX1-206, Transcript of DEAD-box helicase 1, humanhuman

TSL 4

Gene DDX1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-206ENST00000478695 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
DDX1-206ENST00000478695 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
DDX1-206ENST00000478695 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
DDX1-206ENST00000478695 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
DDX1-206ENST00000478695 FOXD1Q16676 465 aa23.88■■□□□ 1.41
DDX1-206ENST00000478695 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
DDX1-206ENST00000478695 MSH5O43196 834 aa22.58■■□□□ 1.21
DDX1-206ENST00000478695 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
DDX1-206ENST00000478695 PIAS4Q8N2W9 510 aaPredicted RBP22.04■■□□□ 1.12
DDX1-206ENST00000478695 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
DDX1-206ENST00000478695 ADRA2BP18089 450 aa21.55■■□□□ 1.04
DDX1-206ENST00000478695 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
DDX1-206ENST00000478695 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
DDX1-206ENST00000478695 CACNB1Q02641 598 aaPredicted RBP19.92■□□□□ 0.78
DDX1-206ENST00000478695 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
DDX1-206ENST00000478695 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
DDX1-206ENST00000478695 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
DDX1-206ENST00000478695 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
DDX1-206ENST00000478695 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
DDX1-206ENST00000478695 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
DDX1-206ENST00000478695 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
DDX1-206ENST00000478695 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
DDX1-206ENST00000478695 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
DDX1-206ENST00000478695 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
DDX1-206ENST00000478695 KCNA4P22459 653 aa18.46■□□□□ 0.55
DDX1-206ENST00000478695 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
DDX1-206ENST00000478695 POTEHQ6S545 545 aa18.29■□□□□ 0.52
DDX1-206ENST00000478695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.487e-12■□□□□ 10.5
DDX1-206ENST00000478695 DSG3P32926 999 aa17.74■□□□□ 0.43
DDX1-206ENST00000478695 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
DDX1-206ENST00000478695 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
DDX1-206ENST00000478695 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
DDX1-206ENST00000478695 CAPN15O75808 1086 aa17.59■□□□□ 0.41
DDX1-206ENST00000478695 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
DDX1-206ENST00000478695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
DDX1-206ENST00000478695 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
DDX1-206ENST00000478695 APLP2Q06481 763 aa17.35■□□□□ 0.37
DDX1-206ENST00000478695 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
DDX1-206ENST00000478695 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
DDX1-206ENST00000478695 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
DDX1-206ENST00000478695 ABCB7O75027 752 aa17.16■□□□□ 0.34
DDX1-206ENST00000478695 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
DDX1-206ENST00000478695 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
DDX1-206ENST00000478695 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
DDX1-206ENST00000478695 ZBTB22O15209 634 aa16.88■□□□□ 0.29
DDX1-206ENST00000478695 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
DDX1-206ENST00000478695 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
DDX1-206ENST00000478695 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
DDX1-206ENST00000478695 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
DDX1-206ENST00000478695 POLA2Q14181 598 aa16.6■□□□□ 0.25
DDX1-206ENST00000478695 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
DDX1-206ENST00000478695 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
DDX1-206ENST00000478695 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
DDX1-206ENST00000478695 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
DDX1-206ENST00000478695 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
DDX1-206ENST00000478695 HAX1O00165 279 aa16.21■□□□□ 0.19
DDX1-206ENST00000478695 FBLN2P98095 1184 aa16.2■□□□□ 0.18
DDX1-206ENST00000478695 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
DDX1-206ENST00000478695 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX1-206ENST00000478695 EVX2Q03828 476 aa16.08■□□□□ 0.16
DDX1-206ENST00000478695 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
DDX1-206ENST00000478695 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
DDX1-206ENST00000478695 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
DDX1-206ENST00000478695 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
DDX1-206ENST00000478695 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
DDX1-206ENST00000478695 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
DDX1-206ENST00000478695 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
DDX1-206ENST00000478695 LHX8Q68G74 356 aa15.68■□□□□ 0.1
DDX1-206ENST00000478695 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
DDX1-206ENST00000478695 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
DDX1-206ENST00000478695 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
DDX1-206ENST00000478695 GABBR2O75899 941 aa15.59■□□□□ 0.09
DDX1-206ENST00000478695 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
DDX1-206ENST00000478695 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX1-206ENST00000478695 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
DDX1-206ENST00000478695 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
DDX1-206ENST00000478695 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
DDX1-206ENST00000478695 POTEIP0CG38 1075 aa15.33■□□□□ 0.04
DDX1-206ENST00000478695 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
DDX1-206ENST00000478695 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
DDX1-206ENST00000478695 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
DDX1-206ENST00000478695 FKBP8Q14318 412 aa15.08■□□□□ 0
DDX1-206ENST00000478695 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
DDX1-206ENST00000478695 PROM2Q8N271 834 aa15.02■□□□□ -0
DDX1-206ENST00000478695 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
DDX1-206ENST00000478695 CLCN6P51797 869 aa14.92□□□□□ -0.02
DDX1-206ENST00000478695 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
DDX1-206ENST00000478695 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
DDX1-206ENST00000478695 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
DDX1-206ENST00000478695 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
DDX1-206ENST00000478695 POTEMA6NI47 508 aa14.81□□□□□ -0.04
DDX1-206ENST00000478695 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
DDX1-206ENST00000478695 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
DDX1-206ENST00000478695 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
DDX1-206ENST00000478695 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
DDX1-206ENST00000478695 MIER1Q8N108 512 aa14.76□□□□□ -0.05
DDX1-206ENST00000478695 POTEGQ6S5H5 508 aa14.74□□□□□ -0.05
DDX1-206ENST00000478695 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
DDX1-206ENST00000478695 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
DDX1-206ENST00000478695 GALR2O43603 387 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms