RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
HOXB3-209ENST00000478644 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
HOXB3-209ENST00000478644 PIK3C2AO00443 1686 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 USP54Q70EL1 1684 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 A6NJR5 290 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 ATP9BO43861 1147 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 IL2RBP14784 551 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 ATP4AP20648 1035 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 MAP2K3P46734 347 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 EPHA4P54764 986 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
HOXB3-209ENST00000478644 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 NLRP8Q86W28 1048 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 ACDQ96AP0 544 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 COG3Q96JB2 828 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 SPON1Q9HCB6 807 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
HOXB3-209ENST00000478644 SCHIP1Q9P0W5 487 aaPredicted RBP8.73□□□□□ -1.01
HOXB3-209ENST00000478644 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 ATXN7L1Q9ULK2 861 aaPredicted RBP8.73□□□□□ -1.01
HOXB3-209ENST00000478644 TNS1Q9HBL0 1735 aaKnown RBP8.73□□□□□ -1.01
HOXB3-209ENST00000478644 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
HOXB3-209ENST00000478644 RNF225M0QZC1 329 aaPredicted RBP8.72□□□□□ -1.01
HOXB3-209ENST00000478644 BCRP11274 1271 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 FOXK2Q01167 660 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.72□□□□□ -1.01
HOXB3-209ENST00000478644 IP6K1Q92551 441 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 ENAMQ9NRM1 1142 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 ZNF358Q9NW07 568 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 ZDHHC3Q9NYG2 299 aa8.72□□□□□ -1.01
HOXB3-209ENST00000478644 MON2Q7Z3U7 1717 aa8.71□□□□□ -1.01
HOXB3-209ENST00000478644 COL18A1P39060 1754 aa8.71□□□□□ -1.01
HOXB3-209ENST00000478644 NFAT5O94916 1531 aa8.71□□□□□ -1.01
HOXB3-209ENST00000478644 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 KCNQ2O43526 872 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 DEPDC4Q8N2C3 294 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.71□□□□□ -1.02
HOXB3-209ENST00000478644 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 USP3Q9Y6I4 520 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 KIF24Q5T7B8 1368 aa8.71□□□□□ -1.02
HOXB3-209ENST00000478644 RREB1Q92766 1687 aa8.7□□□□□ -1.02
HOXB3-209ENST00000478644 ST20-MTHFSA0A0A6YYL1 179 aa8.7□□□□□ -1.02
HOXB3-209ENST00000478644 ATP1A2P50993 1020 aa8.7□□□□□ -1.02
HOXB3-209ENST00000478644 FIGNL1Q6PIW4 674 aa8.7□□□□□ -1.02
HOXB3-209ENST00000478644 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
HOXB3-209ENST00000478644 PPP1R1BQ9UD71 204 aaPredicted RBP8.7□□□□□ -1.02
HOXB3-209ENST00000478644 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
HOXB3-209ENST00000478644 M0R2N6 131 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 BNIP3LO60238 219 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 CLDN10P78369 228 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 RASSF7Q02833 373 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 TEAD4Q15561 434 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
HOXB3-209ENST00000478644 TESK2Q96S53 571 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
HOXB3-209ENST00000478644 STK32BQ9NY57 414 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 PCDHGC4Q9Y5F7 938 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 SRCAPQ6ZRS2 3230 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 A0A1W2PP64 1363 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 TNS2Q63HR2 1409 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 CD163L1Q9NR16 1453 aa8.69□□□□□ -1.02
HOXB3-209ENST00000478644 PEAK1Q9H792 1746 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 OIP5O43482 229 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 DKK1O94907 266 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 AMPHP49418 695 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 NME9Q86XW9 330 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 GLMNQ92990 594 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 OXCT2Q9BYC2 517 aaPredicted RBP8.68□□□□□ -1.02
HOXB3-209ENST00000478644 SMG6Q86US8 1419 aaKnown RBP8.68□□□□□ -1.02
HOXB3-209ENST00000478644 LRRC37A3O60309 1634 aa8.68□□□□□ -1.02
HOXB3-209ENST00000478644 FAM208AQ9UK61 1670 aaKnown RBP8.68□□□□□ -1.02
HOXB3-209ENST00000478644 PALM3A6NDB9 673 aaPredicted RBP8.67□□□□□ -1.02
HOXB3-209ENST00000478644 MARSP56192 900 aaKnown RBP8.67□□□□□ -1.02
HOXB3-209ENST00000478644 SLC15A2Q16348 729 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 TXNRD1Q16881 649 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 KANK3Q6NY19 840 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 SIX5Q8N196 739 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 C7orf43Q8WVR3 580 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
HOXB3-209ENST00000478644 KIAA1024Q9UPX6 916 aa8.67□□□□□ -1.02
HOXB3-209ENST00000478644 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 A0A1W2PNR3 127 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms